Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05400 ATGCCATGGTTTTTTGTAAGTGTTTGGAGACTAGTTTCTCGCTTCCTAGAGAAGGCAACACTAGAAAAGATTGTAATTGTAAGCAATGAGGATGAGAGAAGGGAGTTTATAAGAGAGGTTGGTGAAGAGGTTCTGCCAGAAGAATATGGTGGAAAAGCAAAGCTTGTAGCTCTCCAAGATGTTGAATTGACACCTCAGGAAAATGGAACAACAAATTAA 219 0.3927 MPWFFVSVWRLVSRFLEKATLEKIVIVSNEDERREFIREVGEEVLPEEYGGKAKLVALQDVELTPQENGTTN. 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05400 72 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 1 57 IPR001251 -
Seca10g05400 72 SUPERFAMILY CRAL/TRIO domain 1 55 IPR036865 -
Seca10g05400 72 PANTHER OS03G0850700 PROTEIN 1 61 - -
Seca10g05400 72 CDD SEC14 1 52 IPR001251 -
Seca10g05400 72 Pfam CRAL/TRIO domain 1 51 IPR001251 -
Seca10g05400 72 Gene3D - 1 69 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05400 Seca-Chr10 122767148 122771163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05400 - - gmx:100811048 130.568
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05400 10 122767148 122771163 Seca10g05400 10 122767148 122771163 ECH