Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05331 ATGGCTGGTGTGAAGTTTGCACAGGGACTCATCATACTAGTTATAACTGCTTCAATGTTTGCAGTGAGCATGGCCAACAAGGACTGGTCCTTTGGTTTCAACTACACTGACTGGTGGTCCAGATTTGGGAATCATCACCAGAACAAAACACAACAAGTACAACCCAAGGAGATCATTGTTGGTGGTTCCGAGCATTGGCACTATGGCTACAACTACACCGATTGGGCCATCAAGAATGGCCCATTTTACGTCAATGATACTCTAGTTTTCAAGTACGATGCTCCAAATGCCACCACTTTCCCACACAGCGTGTACATGTTTAAAATTTTTTGGAGCTTCTTGAATTGTGACATTAAAAGGGCTAAGATGGTGGCAAATCCCACACAAGGTGTAGGAGAGGGCTTCAAGTTTGTGTTGAAGAGGTGGCAACCTTACTACTTCGCCTGTGGCGAGCGAAATGGCTTCCATTGCAACAATGGGACAATGAAGTTCGCTGTCATGCCAATGCTTCGTCCCTTCTGGTCGTGGCCATGA 534 0.4588 MAGVKFAQGLIILVITASMFAVSMANKDWSFGFNYTDWWSRFGNHHQNKTQQVQPKEIIVGGSEHWHYGYNYTDWAIKNGPFYVNDTLVFKYDAPNATTFPHSVYMFKIFWSFLNCDIKRAKMVANPTQGVGEGFKFVLKRWQPYYFACGERNGFHCNNGTMKFAVMPMLRPFWSWP. 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05331 177 PANTHER GLYCINE-RICH PROTEIN-LIKE 1 172 - -
Seca10g05331 177 Gene3D - 56 172 IPR008972 -
Seca10g05331 177 SUPERFAMILY Cupredoxins 56 168 IPR008972 -
Seca10g05331 177 ProSiteProfiles Phytocyanin domain profile. 56 170 IPR003245 GO:0009055
Seca10g05331 177 Pfam Plastocyanin-like domain 69 160 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05331 Seca-Chr10 121557414 121558761 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05331 - - gmx:100813442 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05331 10 121557414 121558761 Seca10g05331 10 121557414 121558761 ECH