Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05330 ATGGGCAAGACGACGACGTTGCGTACGATCTCACAAGAAGCATTCGATGAGCTTGTGAAAGAGAACATCGACGACCTTGGAATGGAACCCGCCGAGGCCCTCAAAGACGCCATTGAAACCCTCACTCTCCAAGGCGTCGATCTCTCAGGTATTGTGACGTCCGTTCCGGGAGAGAGCAACCCGGTGATAGAGTGCTTAGAAAGGCTGAGGCGGTTAGAGTCTGAAGCGGAGGCTTTGGATGAGATGGTGGAAGTGTTCGATAAGCTCAACGAGTTGTGTGGCGCTGAGAATGCAAATGCGAATGCGAATGCAGCTATTGCGACGAAAAATGGCGGTGTGGAATTGGCTTGTTCTCTTTGTACCAAGATACCACGTGGCACTGGATCTGACCTTGCCCTTCTTTCCACTTTAAACGCTATGGCGTCGCTGCTTCATGATGTTCAAAGTACTGGAACATTTCAGAAAAGTAATGGACCAAGGATTATAATTGGTATCCTAAATGATAACAAGCACAACATAGACGTCTTAAATAGTGGCTTTCGTGTTGTGGCCTCAGCTGCAACTGGTGATGAGATTGTCAAGGAGTCTTTCATGGAGTTGAAAGTTGATGAGCTAATTCTGGAGATAATGTCCATACATAACAACACTGGAATTCAAAGTGTATATGATGCTATTCGTGTACTTTTAACACCTGATGACAATCGAGTTGTTGCTTCTCAAGTATATGGTTATGCACGGAAATTTGCTAAGATTGGAATTGCAGAAGCCATTGTGGACTCTCTGCGTGCAGGACTTAGTTCACCTGACCTAGTTTCAGCATGCATCACGTTAAAGGCCATTGCTGTAAATGATGAAATATGTAAATCCATTGCTGAAAAAGGTGGTATTGATGCAGTACTCAGATGTATAGATGACAGTGGGGAACAAGGCAACAAAGCTGTGGCCAAAGTTTGCTGCTCATTACTTTCAAAGTTAGCAGGAAGTGACACAAACAAAAGTGCAATTGTTGGGAAAGGGGGTATGGATAAGCTAATCAAGCTTTCAGCCAGATATGCTGATGACCCTTCTGTTTTGCAAGAGGTTATGTCTATTATTGCCGTGCTATCATTAAGATCCCCAGAAAATGCAGCCCGTGCCATTGAAGCTGGTGCTGGTGACCTTGCTATTCAAGCCATGCAAAAATTTCCGGCGGCACACCAAATGCAAAGAAACTGCTGCCTTATGATCAGAAATCTGGTAGTGAGAAATCCAGAGAACAGGCAAGTTTATAATTTGTGA 1278 0.4444 MGKTTTLRTISQEAFDELVKENIDDLGMEPAEALKDAIETLTLQGVDLSGIVTSVPGESNPVIECLERLRRLESEAEALDEMVEVFDKLNELCGAENANANANAAIATKNGGVELACSLCTKIPRGTGSDLALLSTLNAMASLLHDVQSTGTFQKSNGPRIIIGILNDNKHNIDVLNSGFRVVASAATGDEIVKESFMELKVDELILEIMSIHNNTGIQSVYDAIRVLLTPDDNRVVASQVYGYARKFAKIGIAEAIVDSLRAGLSSPDLVSACITLKAIAVNDEICKSIAEKGGIDAVLRCIDDSGEQGNKAVAKVCCSLLSKLAGSDTNKSAIVGKGGMDKLIKLSARYADDPSVLQEVMSIIAVLSLRSPENAARAIEAGAGDLAIQAMQKFPAAHQMQRNCCLMIRNLVVRNPENRQVYNL. 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05330 425 PANTHER UNCHARACTERIZED 8 422 - -
Seca10g05330 425 Gene3D - 127 425 IPR011989 -
Seca10g05330 425 SUPERFAMILY ARM repeat 85 422 IPR016024 -
Seca10g05330 425 Coils Coil 62 89 - -
Seca10g05330 425 SMART arm_5 283 327 IPR000225 GO:0005515
Seca10g05330 425 SMART arm_5 372 414 IPR000225 GO:0005515
Seca10g05330 425 SMART arm_5 328 370 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05330 Seca-Chr10 121518424 121529158 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05330 K24166 - gmx:100527792 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05330 10 121518424 121529158 Seca10g05330 10 121518424 121529158 ECH