Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05316 ATGGTTATCATCTTTGATCTCATTGAAGAGGCCAAGCTTCGTTTTCTCTGGTGGTCTCTTTGTATATTCGTTGTTTCATATTTTTTCACTCATACAAGTAAATCTATGTGGATGAATATACCAATGTCCATTTTGTTTGTTGTTGCTCTCCGAGTTCTTCTGAACAATGTGGAGTTCCGTTGGAAGGTTCGACCACCAAGATCACATACTTACCTTTCTCATTTGGAGAGAAAACAATTGTCTCTAGATGATGCACGCCTCTCTACTTCTCCTCCCCCACCCAAATGGAAGAAAAAGATTGATTCTCCTATGGTGGAGGCTGCCTTGAATGATTTCATTGATTTATTATTGAAGGATTTTGTGATAAATATGTGGTATGGAGACATTACTCCAGATTTAGAGTTTCCTGAGCAAATTCGTGATTTAATTATGGATGCTCTTGCTGAAGTTTCTGTGAGGGTTAGAGAGATAAACCTTGTTGACTTGCTCACAAGAGACATAGTTGATTTAATAGGTGATCATATAGAACTATTCAGAAGAAATCAAGCTGCTATAGGTGTTGATGTCATGTTAACATTATCTTCTGAGGAGAGGGATGAAAGATTGAAATTCCATCTGTTGAATTCTAAGGAGCTTCATCCAGCACTAATATCTCCAGATAGTGAGTACAAGGTTCTTCAGCAACTAATGAGTGGAGTATTAGCTACAGTACTAAGAAAACGAGAAGCTCAATGTCCTGTCATTCGATCTATAGCACGGGAAATTTTAACTTGTTTGATATTGCAACCTGTAATGAATTTGGCAAGCCCTGTGTGTATCAATGAGCAGATTGAATCTCTTCTAATTTTCCTTAATGATGAGGGTATAAATTGGATGGGTGGTTGTGATCAGTTGGCTAATGTTACAAATCATAATCATGGACATGATAATCACACAACTTCAGCTGATTGGGCCCAAATGCTAGAAGCTGCAACTCAGAGAAGAACTGAAGTTCTCATGCCAGAGAATCTAGAGAACATGTGGGCACGAGGAAGCAATTACAGAAGGAATTTAACTCAAGAAAGTAAAATTGGAACATATGCAGTTCCAGAAGGAAAGTCTTTATTGCATAATGTGGGATCAGATCCTCTATTAAATGTTGGAAGCACAACAAGATCAGAGTCTTCACCAGATCCTGATCACAAGGAATTATCTTTCGAAGCAGATGATGAAGTGAATGATATTAAGGATTTCTCTTCTAATAAGTATAAATTATCACTCAAGAGATCAAGTAGTTCTTCTGTCTTGGGAATCCAACCTCATAAAGGAGGGTCAACAATGCCAGAGTTCTACACCCCTGAATTTGAAAAACATGAAGGATTTCAGGGAAAGATTGGTTCTGACATGATAATTAGAAGAGAGGCACAGTGTGTGCCTAAGCTTCGGTGCCGGGTGATTGGAGCATATTTTGAGAAAATCGGATCCACATCTTTTGCTGTGTACTCAATTGCAGTGACTGATGGGCAAGAGAAAACTTGGTTTGTTCAAAGAAGATACAGGAATTTTGAGAGATTGCATCGACATCTGAAAGATATTCCCAATTACTCATTACACTTGCCTCCCAAAAGGATATTTTCCTCAAGCACAGAGGATGCCTTCGTCCATCAGCGTTGCATTCAACTTGATAAATATCTCCAGGATCTCCTATCAATAGCTAATGTTGCTGAACAACATGAAGTATGGGACTTTTTTAGTGTTTCATCAAAGAATTACTCTTTTGGGAAATCTTCTTCAATGATGAGGACCCTAGCAGTCAATGTAGATGATGCTGTAGATGATATTGTACGCCAATTTAAAGGTGTCTCAGATGGTTTAATAAGAAAAGTTGTTGGTTCTTCATCCCCCACTACCGAAGGTTCTTCTGCATCTACCACTTGGAACACTTCTTATAACATGGATGAAATTGATAAAAGCATTTCAAAGAAAAATACTACAGAGAGTGTGTTAAACTCTGATAATGAGGAAGGTGAAAAAGATGTTAATTTTGACCATGAGAATATTGATAGAGAAGTAGAAGAAGATAATAGTTGGCACTCTGAGAATGAATTAAGTTCAAAGGATTATTCACAACGAGTAATAAATCATGGTAATGAGTCTAGTAATTTGGATATAGATAGAAAACATGAAGTCATGATGGAAGCAAAGGTTGGAAAGGATGTTCCAGCTACAAATTTGACTTTAGTTCCTGATAATTTGGACGATCCAGTTGGAGTGCCACCTGAGTGGACCCCACCCAATGTGACTGTGCCTATTCTGAATTTGGTTGACAACATATTTCAGCTTAATAAAAGAGGCTGGCTAAGAAGACAGGTCTTTTGGATATCAAAACAGATATTACATTTGGTGATGGAAGATGCTATTGATGATTGGCTCCTAAGTGAGATTCATTGGCTTCGGAGAGAGGATACCATTGCCCAAGGGATTCGGTGGGTCCAAGATATCCTATGGCCTAGTGGTACATTTTTTCTAAGGGTACAGACCCCTCAGGTGTTAATTGGTGGCAATGTAACTGATCAAAAGCCTTTACAAAACACAAGTGAATCTATTGAAAGAAAGATTAGAAAATCACAATCAGGGTCTTTCGAGCAACAACTTGAAGCTGCTCGTAGAGCAAGTGATGTGAAGAAACTGCTCTTTGATGGAGCTCCAGCGGCCTTAGTTAGCTTAATTGGGCAGAAGCAGTACAAACGTTGTGCTAGTGATATATACTACTTTAGTCAGTCTTCTATATGTGTGAAGCAACTTGCTTACGCAATCCTTGAACTTTTGCTTATATCCATCTTCCCTGAGTTGCGTAATGTTGTCATGAGTGTTCATGAGAATATGCATGTTCACCAACCTGTATAA 2886 0.3839 MVIIFDLIEEAKLRFLWWSLCIFVVSYFFTHTSKSMWMNIPMSILFVVALRVLLNNVEFRWKVRPPRSHTYLSHLERKQLSLDDARLSTSPPPPKWKKKIDSPMVEAALNDFIDLLLKDFVINMWYGDITPDLEFPEQIRDLIMDALAEVSVRVREINLVDLLTRDIVDLIGDHIELFRRNQAAIGVDVMLTLSSEERDERLKFHLLNSKELHPALISPDSEYKVLQQLMSGVLATVLRKREAQCPVIRSIAREILTCLILQPVMNLASPVCINEQIESLLIFLNDEGINWMGGCDQLANVTNHNHGHDNHTTSADWAQMLEAATQRRTEVLMPENLENMWARGSNYRRNLTQESKIGTYAVPEGKSLLHNVGSDPLLNVGSTTRSESSPDPDHKELSFEADDEVNDIKDFSSNKYKLSLKRSSSSSVLGIQPHKGGSTMPEFYTPEFEKHEGFQGKIGSDMIIRREAQCVPKLRCRVIGAYFEKIGSTSFAVYSIAVTDGQEKTWFVQRRYRNFERLHRHLKDIPNYSLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFFSVSSKNYSFGKSSSMMRTLAVNVDDAVDDIVRQFKGVSDGLIRKVVGSSSPTTEGSSASTTWNTSYNMDEIDKSISKKNTTESVLNSDNEEGEKDVNFDHENIDREVEEDNSWHSENELSSKDYSQRVINHGNESSNLDIDRKHEVMMEAKVGKDVPATNLTLVPDNLDDPVGVPPEWTPPNVTVPILNLVDNIFQLNKRGWLRRQVFWISKQILHLVMEDAIDDWLLSEIHWLRREDTIAQGIRWVQDILWPSGTFFLRVQTPQVLIGGNVTDQKPLQNTSESIERKIRKSQSGSFEQQLEAARRASDVKKLLFDGAPAALVSLIGQKQYKRCASDIYYFSQSSICVKQLAYAILELLLISIFPELRNVVMSVHENMHVHQPV. 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05316 961 ProSiteProfiles PXA domain profile. 102 281 IPR003114 -
Seca10g05316 961 SUPERFAMILY PX domain 470 583 IPR036871 GO:0035091
Seca10g05316 961 MobiDBLite consensus disorder prediction 372 401 - -
Seca10g05316 961 SMART PX_2 470 580 IPR001683 GO:0035091
Seca10g05316 961 MobiDBLite consensus disorder prediction 650 673 - -
Seca10g05316 961 SMART PXA_3 102 287 IPR003114 -
Seca10g05316 961 ProSiteProfiles PX domain profile. 472 584 IPR001683 GO:0035091
Seca10g05316 961 Gene3D - 474 589 IPR036871 GO:0035091
Seca10g05316 961 Pfam Sorting nexin C terminal 779 922 IPR013937 -
Seca10g05316 961 CDD PX_SNX19_like_plant 474 578 - -
Seca10g05316 961 PANTHER PX SERINE/THREONINE KINASE PXK 98 957 - -
Seca10g05316 961 Pfam PXA domain 102 280 IPR003114 -
Seca10g05316 961 Pfam PX domain 502 579 IPR001683 GO:0035091
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05316 Seca-Chr10 121265962 121285965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05316 K17925 - gmx:100804013 1504.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05316 10 121265962 121285965 Seca10g05316 10 121265962 121285965 ECH