Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05307 ATGCCAGAGGTTTACACTGTGAAGGTTGAGGAGGGAAAGCCTGCAACTGATGGAAAGCCATCAGTAGGGCCTGTCTATAGGTGCATTTATGCCAAAGATGGTCTCTTGGAGTTGCCTGCTGGTTTAGAGTCCCCATGGGATTTCTTCAGGGACTCTGCTAAGAGGAACCCCAACAATCCAATGCTGGGTAGGCGTCAAAAACTTGATTCTAAGGTTGGTCCCTATGCATGGCTCACATATAAAGAGGTTTATGATGCTGCCATCCAAATGGGCTCTGCCATGAGGAGCCTTGGTGTCAATCCTGGAGATCGTTGTGGCATATATGGGTCAAACTGCCCTGAATGGATCATTGCAATGGAGGCTTGCAATAGCTGTGCAGTAACTTATGTTCCATTATATGACACCCTTGGTCCTAACGCTGTGGAGTTCATCATAAATCATGCTGAAGTTTCAATTGCATTTGTACAGGAAAAAAAGATTCCATCAATTTTGTCATGTCTTGAACGGTGTTCTTCAAATCTTAAAACTATTGTGAGCTTTGGAAATGTTTCAACCACACAAAAGAAGCAAGCTGAGGAGCTTGGCACATCCTGCTTCTCTTGGGGAGAGTTTCTTCAATTGGGAAGTTTGGATTGGGATCTTCCATCAAAAAAGAAGACTGACATTTGCACAATAATGTACACAAGTGGAACAACTGGAGAACCCAAAGGTGTCATTATTAAGAATGAGGCTTTCATGGCTGAAGTGTTGTCTATTGACCAAATACTTTTGTTAACAGACAGAGTGGCAGCAGAAGACGATGTGTACTTCTCCTTTCTTCCTCTTGCTCATGTATATGACCAGATAATGGAGACCTATTGCATTTCCAAGGGCTCCTCAATAGGATTTTGGCAAGGCGATGTTAGGTTCTTGATGGAAGATGTTCAGGCACTGAAACCAACTATATTTTGTGGTGTTCCTAGAGTTTTTGACCGCATTTATGCTGGTATCAATAGCAAAGTTTCATCAGGAGGATCACTGCAGAGTACATTGTTCCAATATGCATACCACTACAAGTTAAAATATCTGGAGAAGGGTCTTCCACAACACAAAGCAGCACCTTTGTTTGATAGGCTTGTGTTTGATAAGACAAAACAAGCACTAGGTGGACGTGTTCGTATCCTCTTATCAGGAGCTGCTCCTTTGCCTAGGCATGTGGAGGAGTTTATGAGAGTCACTAGTGGATCCACATTATCACAAGGATATGGTCTTACAGAAAGTTGTGCTGGGTGTTTCACAGCAATTGGGGATGTGTATTCTATGACAGGAACAGTTGGAGTCCCCATGACAACCATTGAGGCCAGGCTTGAATCTGTGCCAGAGATGGGATATGATGCACTTTCCAGTGTAGCCCGTGGAGAAATTTGCGTCAGAGGAATTACATTGTTCTCTGGTTATCACAAGCGTCAAGATCTTACTAAAGAGGTTATGGTAGATGGTTGGTTTCATACAGGTGACATTGGAGAATGGCAACCAAATGGAGCCTTGAAAATTATTGATAGGAAAAAGAATATCTTTAAATTGTCTCAAGGAGAATATATTGCTGTGGAGAATATTGAAAACAAGTATTTGCAATGCCCTCTTATAGCATCGATTTGGGTCTATGGAAACAGTTTTGAGTCATTCTTGGTGGCTGTGGTGGTCCCTGAAAGAAAGGCCCTAGAGGATTGGGCAAAAGAGCATAATTTGACTGATGATTTTAAATCTTTATGTGAAAATTTAAAGGCAAGAAAATATATTTTGGATGAACTCAACAGTACTGGCCAGAAACACCAACTTAGAGGATTTGAGCTGCTAAAAGCTGTTCATCTGGAACCAATTTCCTTTGACATGGAGAGAGATCTAATAACTCCAACATTCAAATTGAAGAGACCACAATTGCTCAAGTACTATAAGGTTTGCTTCATGTGCTATGATCAATATTTCATACTTATTGACTTCATATTATACTTGATGCTATTAAGCTTTTAG 2010 0.4114 MPEVYTVKVEEGKPATDGKPSVGPVYRCIYAKDGLLELPAGLESPWDFFRDSAKRNPNNPMLGRRQKLDSKVGPYAWLTYKEVYDAAIQMGSAMRSLGVNPGDRCGIYGSNCPEWIIAMEACNSCAVTYVPLYDTLGPNAVEFIINHAEVSIAFVQEKKIPSILSCLERCSSNLKTIVSFGNVSTTQKKQAEELGTSCFSWGEFLQLGSLDWDLPSKKKTDICTIMYTSGTTGEPKGVIIKNEAFMAEVLSIDQILLLTDRVAAEDDVYFSFLPLAHVYDQIMETYCISKGSSIGFWQGDVRFLMEDVQALKPTIFCGVPRVFDRIYAGINSKVSSGGSLQSTLFQYAYHYKLKYLEKGLPQHKAAPLFDRLVFDKTKQALGGRVRILLSGAAPLPRHVEEFMRVTSGSTLSQGYGLTESCAGCFTAIGDVYSMTGTVGVPMTTIEARLESVPEMGYDALSSVARGEICVRGITLFSGYHKRQDLTKEVMVDGWFHTGDIGEWQPNGALKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLIASIWVYGNSFESFLVAVVVPERKALEDWAKEHNLTDDFKSLCENLKARKYILDELNSTGQKHQLRGFELLKAVHLEPISFDMERDLITPTFKLKRPQLLKYYKVCFMCYDQYFILIDFILYLMLLSF. 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05307 669 CDD LC-FACS_euk 73 645 IPR045311 GO:0004467|GO:0006631
Seca10g05307 669 Gene3D - 39 514 IPR042099 -
Seca10g05307 669 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 645 - -
Seca10g05307 669 Pfam AMP-binding enzyme C-terminal domain 532 574 IPR025110 -
Seca10g05307 669 Pfam AMP-binding enzyme 49 522 IPR000873 -
Seca10g05307 669 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Seca10g05307 669 SUPERFAMILY Acetyl-CoA synthetase-like 40 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05307 Seca-Chr10 121097664 121104353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g05307 5 645 Acyl Lipid Metabolism Gene Families AT4G23850 57.632 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05307 K01897 - gmx:100779735 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05307 10 121097664 121104353 Seca10g05307 10 121097664 121104353 ECH