Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05306 ATGTATTCCTCCAGCAGAGGCAATAATAATTTTCATGAAAAAGACTACACAGGCATGAAATACAGTACTAGTAGTAGTAGTAGTGAGATATCCCATTTCAGCCATCCAAAACACAAGCTGAGATTTGACTACTCCCAATTCCCATTCAAATGTGATGGTTGCAAGGAAATTGGCATAGGCTCACGCTACAAATGCTCCTCTTCTTGTGACTATGACCTTCACATGCACTGTGCCATACCTCCTAATTCTCTGTTCCACCCTTTCTACCCAAAATGCTCGTTCCAATTCCTCTCTAAGCCACAAGGTGACACTCCTCGCTACTGCAACGCATGTGAGAAGGCTGTCACTGGCTTCAACTACCACTGCTTCTCATGCGGCTTCGACCTTCACCCTTGTTGTGCAAAGCTTCCAATGGTGCTTGATGATGGTGAGATAAAGCTGTATCTATACAGGAAAGTGAGTTCGCCGTGTCAGCGATGTGGACAGAAAGGGCGTAGCTGGAGTTACAGGTCGTCGTGCAAGAAGTACAATTTGCATGTGGCGTGTGTGAGGGAAATGATTGTGGAGAGTTGGCATCAGATTGGAAGGAGGACAATGGCAGCGGAGATTGGGATTCCAAGCCTTAAGAATAGTATGCTGGCTAATAATGGTGGTTGTAGGAGTAAAGGGAAGGTGAGGAAGGGATGTGAGATTGCTGGAATGGCTCTGCAGATTGTGGTGTCTGCAGTGTTGGGAGATCCAACGGCTCTGATTGCTGGGATTATGGGCTCATTGATGTCAAGGGCTTGA 789 0.4651 MYSSSRGNNNFHEKDYTGMKYSTSSSSSEISHFSHPKHKLRFDYSQFPFKCDGCKEIGIGSRYKCSSSCDYDLHMHCAIPPNSLFHPFYPKCSFQFLSKPQGDTPRYCNACEKAVTGFNYHCFSCGFDLHPCCAKLPMVLDDGEIKLYLYRKVSSPCQRCGQKGRSWSYRSSCKKYNLHVACVREMIVESWHQIGRRTMAAEIGIPSLKNSMLANNGGCRSKGKVRKGCEIAGMALQIVVSAVLGDPTALIAGIMGSLMSRA. 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05306 262 SUPERFAMILY Cysteine-rich domain 59 140 IPR046349 -
Seca10g05306 262 Gene3D - 42 88 IPR043145 -
Seca10g05306 262 Pfam C1 domain 33 78 IPR004146 -
Seca10g05306 262 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 25 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05306 Seca-Chr10 121088999 121089787 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05306 - - tpra:123902843 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05306 10 121088999 121089787 Seca10g05306 10 121088999 121089787 ECH