Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05285 ATGCCCCTCTCACACCCGCGCACGCTCCCATCCCACCGCCGACGATTCCCGCCGATGTCGCTCCGCCACGCTGCCGGTAACTCCTCCGCCTCCATGTCGCCGGAATCCACCGCCCTCCATCTCCGGCTGACTCTCTTCGCTGCGCTATTATTCACCGCCGTTTCCATCTCCTGCTTTCTTCTCTTCAGAGACGCCGATTACTCTCGCTTCTCTTCATATTATCAATTGCCCCGTTTTCCGACCGTTTTCCCGTCGGCGTCCAACGATTCCGCAGAGGATGGATTGATGGAATATTACTATTTTGGACAGGCTAGCAATGAATATCCACTTGAAAAGATTTTGAATGAGGCTGCCATGGAAGACAGAACTGTTATTTTGACCACATTGAATGAAGCATGGGCAGCACCGAATTCAGTCATTGATCTTTTCCTTGAGAGCTTTAGAATTGGAGATCGTACTCGTAGGCTTTTGAATCATTTAGTAATTATTGCATTGGATAAGAAAGCATTTATACGCTGTCAGGTTATACACACCTATTGCTTTTTGCTTGTTAGTGAAGGTATTGATTTTCATGAAGAGGCGTACTTTATGACTCCTCACTACTTGAAGATGATGTGGAGAAGGATTGATTTCCTGCGTTCTGTTCTTGAGATGGGGTACAATTTTGTGTTCACAGATGCTGACATCATGTGGTTTAGGGACCCATTTCCACGGTTTCACCATGATGCAGATTTTCAGATAGCATGTGATCATTTCACGGGTAGCTTTGATGATGTAGAGAACAGACCCAATGGAGGGTTCAACTTTGTAAAGTCCAATAATAGGTCAATAGAGTTTTACAAATTCTGGTACTCTTCACAAGAAACCTATCCTGGATACCACGATCAGGATGTCCTCAATTTCATCAAGGTTGACCCTTTCATTACTGATATAGGACTGAAGATGAAATTCTTGGATACAGCTAATTTTGGTGGACTTTGTGAACCAAGTAGAGATTTAAATCAAGTTTGTACAATGCATGCAAATTGTTGCTATGGTATGGATAGTAAGCTTCACGATCTTAGAATTATGCTTCAGGATTGGAGACATTATTTGACCTTGCCTCCAAGTTTAAAGAGATTGTCAGTTGTTTCCTGGAGGGTTCCTCAGAAATGCAGCCTTGATTCTCTCAGGTCCCATGGTTCACCAGAGAAGAGTGTTCAAGAAGATTAA 1212 0.4365 MPLSHPRTLPSHRRRFPPMSLRHAAGNSSASMSPESTALHLRLTLFAALLFTAVSISCFLLFRDADYSRFSSYYQLPRFPTVFPSASNDSAEDGLMEYYYFGQASNEYPLEKILNEAAMEDRTVILTTLNEAWAAPNSVIDLFLESFRIGDRTRRLLNHLVIIALDKKAFIRCQVIHTYCFLLVSEGIDFHEEAYFMTPHYLKMMWRRIDFLRSVLEMGYNFVFTDADIMWFRDPFPRFHHDADFQIACDHFTGSFDDVENRPNGGFNFVKSNNRSIEFYKFWYSSQETYPGYHDQDVLNFIKVDPFITDIGLKMKFLDTANFGGLCEPSRDLNQVCTMHANCCYGMDSKLHDLRIMLQDWRHYLTLPPSLKRLSVVSWRVPQKCSLDSLRSHGSPEKSVQED. 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05285 403 PANTHER EXPRESSED PROTEIN-RELATED 47 385 IPR044821 -
Seca10g05285 403 Pfam Nucleotide-diphospho-sugar transferase 156 354 IPR005069 -
Seca10g05285 403 SUPERFAMILY Nucleotide-diphospho-sugar transferases 178 304 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05285 Seca-Chr10 120780892 120785062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05285 - - mtr:25480674 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05285 10 120780892 120785062 Seca10g05285 10 120780892 120785062 ECH