Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05254 ATGGGTTCCGAAGTGGAACAACCCATTCCAAACTCAACAACACAAACAACTAACACCAATACTCAAACACCCAACGATAACGACAAAATCGCTACCGAACTTCCCCACGGAATTCAAAACATTTCTTCAACCGAAAATCACGCTAACGGTAACATAGCCGTTACGACCACTCTCTCAATCGTTCAGCCTCATTCACTTCTTCCGAAACCAGTTCCCCCTGCGGCTTCGAACAACCGAAACGACGTCGTTCCGTCCGCGTTCGGGAGGTTCCTTCGGCAGCGCAGTAACGACCTGTCGTCAGCGATCTCGAGAGGGATCTCGTCGCTGAAGAACTCGATCGACGACCGAAACTACGATGAGTCGTTTAAGAAGATGGAAAACGACGTGACGGAGTTCAAACTTTCAGGTCTGAAGGTGGTTGTGATGGTGAAAAACGACGCGTCGTTTGTGAAGGGACGAATCAGCTTCTTCTCGAGGTCGAATTGCAGAGACTGTTCTGCGGTGAGAAGGTTCTTCAGGGAGAGAGGGTTGAGGTACGTGGAGATCAACGTGGACGTGTACACGGAGCGAGAGAAGGAGCTTCGAGAGAGAACGGGGAGTGTAACTGTGCCGAAGATTTTCTTCAATGAGAAACTGATCGGAGGATTGGTGGAACTCAATGCGCTCAGGAAGAGTGATGAGTTGGAGAAGAGATTGGCGGAGACGGTGAACGGAAAATTTTCCGGCGATGTGCCGGCGGCGCCGGCGTACGGGTTCGACGAGATGCCTGAAGGGAAAGAGGATGAGGAGGAAGAGGAGATGGTGAAGGTGGTGAGAGTTTTGAGGCAGAGATTGCCGATTCAGGACCGTTTGATGAAGATGAAGATTGTGAAGAATTGTTTCGCTGGGAATGAGTTGGTGGAGCTTCTGGTTCGCCACCATGGTTGTGCTCCTTCCAAGGCTGTTGAGATCGGAAAAGAGTTATGCAAGAAGCATTTCATCCATCATGTTTTCGGGGAAAATGACTTTGAGGAGGGAAACCACTTCTATCGATTCCTTGAGCATGAACCATTTATCTCCAAATGCTTTAATTTCCGTGGTGCCACAAATGATAGTGAACCGAAGGGTGCAGCTGCAGTTTGTGATAGGCTCACCAAGATTATGTATGCCATTCTTGAGTCTTATGCTTCTGATGACAGGCACCATGTTGATTATGTGGCCATTAGCAAAAGTGAGGAATTTCGGAGGTATGTAAACATGACCCAGGATCTGCAGCGGGTGGATCTCTTGGAACTATCAGAAAACGAGAAGCTTACCTTCTTCTTAAATTTGTACAATGCCATGGTCATCCATGCTGTTATTAGAGTAGGGTGTCAAGAAGGTGTAATTAATAGGAGATCCTTCTCTGATTTCCAGTATCTGATTGGAGGGCATCCTTATTCTCTTAGTACTATTAAAAATGGTATCCTTAGAAGCAATCGGAGGTCACCATATTCCTTAGTCAAGCCCTTCGGCACAAGAGACAGGCGGTTAGAGCTTGCACTTGTCAAAATGAATCCGTTAATACACTTTGGACTTTGTAATGGCACAAGGTCAAGCCCAAAAGTGAGGTTTTTCTCACCCTACAGAGTTGCAGAAGAATTGAGATGTGCTGCTAGAGAGTTCTTTGAGAATGATGGAATTGAAGTGGACCTGGAGAAGAGGACCATTCATCTCACTCCAATTTTCAAATGGTACACAGGGGATTTTGGACAAGAGAGAAACATAGTAAAGTGGATAATTAATTACTTGGATGCGAATAAAGCAGGTCTTTTGACACATCTCTTAGCTGATGGTGGTCCTGTTAATATATCATACAAGAATTATGATTGGTCAATAAATTCTTGA 1866 0.4582 MGSEVEQPIPNSTTQTTNTNTQTPNDNDKIATELPHGIQNISSTENHANGNIAVTTTLSIVQPHSLLPKPVPPAASNNRNDVVPSAFGRFLRQRSNDLSSAISRGISSLKNSIDDRNYDESFKKMENDVTEFKLSGLKVVVMVKNDASFVKGRISFFSRSNCRDCSAVRRFFRERGLRYVEINVDVYTEREKELRERTGSVTVPKIFFNEKLIGGLVELNALRKSDELEKRLAETVNGKFSGDVPAAPAYGFDEMPEGKEDEEEEEMVKVVRVLRQRLPIQDRLMKMKIVKNCFAGNELVELLVRHHGCAPSKAVEIGKELCKKHFIHHVFGENDFEEGNHFYRFLEHEPFISKCFNFRGATNDSEPKGAAAVCDRLTKIMYAILESYASDDRHHVDYVAISKSEEFRRYVNMTQDLQRVDLLELSENEKLTFFLNLYNAMVIHAVIRVGCQEGVINRRSFSDFQYLIGGHPYSLSTIKNGILRSNRRSPYSLVKPFGTRDRRLELALVKMNPLIHFGLCNGTRSSPKVRFFSPYRVAEELRCAAREFFENDGIEVDLEKRTIHLTPIFKWYTGDFGQERNIVKWIINYLDANKAGLLTHLLADGGPVNISYKNYDWSINS. 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05254 621 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 16 620 - -
Seca10g05254 621 ProSiteProfiles Glutaredoxin domain profile. 142 239 - -
Seca10g05254 621 MobiDBLite consensus disorder prediction 1 29 - -
Seca10g05254 621 Pfam Glutaredoxin 156 213 IPR002109 -
Seca10g05254 621 SUPERFAMILY "Winged helix" DNA-binding domain 266 363 IPR036390 -
Seca10g05254 621 Gene3D - 262 391 IPR036388 -
Seca10g05254 621 ProSiteProfiles DEP domain profile. 274 347 IPR000591 GO:0035556
Seca10g05254 621 MobiDBLite consensus disorder prediction 1 31 - -
Seca10g05254 621 SMART DEP_3 274 347 IPR000591 GO:0035556
Seca10g05254 621 Pfam Protein of unknown function, DUF547 424 548 IPR006869 -
Seca10g05254 621 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 278 345 IPR000591 GO:0035556
Seca10g05254 621 Gene3D Glutaredoxin 150 236 - -
Seca10g05254 621 SUPERFAMILY Thioredoxin-like 152 233 IPR036249 -
Seca10g05254 621 CDD DEP 267 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05254 Seca-Chr10 120033430 120040358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05254 - - psat:127093764 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05254 10 120033430 120040358 Seca10g05254 10 120033430 120040358 ECH