Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05085 ATGGCTGCTGAGGTTTTGAGCAAAACCATCTTTGCTTCTTGGTGGTGGAATGGCCACAAGCAACATCATGGTATCTTCAGTTCTTCAAAGATGTTTCCTTCTCTCAAGCTAAAACCTCAGGTTCTAAGATCTTCATTTGGCAAAGGGAGAGGGAAATCTCTGTTTCGAGCACAGACGGGTCAGACATGGTGGGAGAGGCAGAGGGACCCACCGAAATGGTGGGAGGTGGAGGTTCCTAAACCGAACATGAGAGATGTGAGTTCGGTTGAAGATCTTGTTGACTCTCTATTGAACGCAGGGGACAAGCTCGTCATTGTTGGTTTCTACTCCCCTGCCTGTCTTGGCTGCAAATACCTTCATCCTAAGATATGTGAGCTGGCAGAAATGAATCCTGATGTTGAGTTCCTTTGGGTGAACTGTGAGAACCATCGGTCTCTGTGTTATAGCCTTAAAGTCTTTGTCCATCCCTTCTTCCACTTCTATAGAGGTGCTGATGGTCATTTATGCAAATTTAGCTGTACCCTTGCCACGATCAACAAGTTTAAAGATTTATTGGACAAACACAAGCAAGATAGATGCAGCTCAGGCCCAACCAAAGGATTGGATGAACAAGAGCTCCAAGCTCTGTCTCAGATTGAAGATGATTCTTTTATATACAGACCAAAAGCGGGAGATGATGCATTTTTTTAA 690 0.4449 MAAEVLSKTIFASWWWNGHKQHHGIFSSSKMFPSLKLKPQVLRSSFGKGRGKSLFRAQTGQTWWERQRDPPKWWEVEVPKPNMRDVSSVEDLVDSLLNAGDKLVIVGFYSPACLGCKYLHPKICELAEMNPDVEFLWVNCENHRSLCYSLKVFVHPFFHFYRGADGHLCKFSCTLATINKFKDLLDKHKQDRCSSGPTKGLDEQELQALSQIEDDSFIYRPKAGDDAFF. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05085 229 CDD TRX_family 99 163 - -
Seca10g05085 229 PANTHER THIOREDOXIN, MITOCHONDRIAL 55 217 - -
Seca10g05085 229 SUPERFAMILY Thioredoxin-like 77 188 IPR036249 -
Seca10g05085 229 Pfam Thioredoxin 94 165 IPR013766 -
Seca10g05085 229 ProSiteProfiles Thioredoxin domain profile. 67 214 IPR013766 -
Seca10g05085 229 Gene3D Glutaredoxin 76 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05085 Seca-Chr10 116613868 116615407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05085 - - vra:106753897 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05085 10 116613868 116615407 Seca10g05085 10 116613868 116615407 ECH