Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05072 ATGCCTATTAGTAGTAGAGACCCTCTCGTTGTTGGGCGTGTGATTGGGGATGTATTAGACCCCTTTGAAAGTTCTTTTCCTATGAGAGTCACTTACAATAATAGAGATGTTACCAATGGCTGTGAATTCAGACCTTCTCAAGTTCTCAACCAACCAAGAATAACCATCGGTGGAGATGACCTCAGGAACTTCTACACTCTGATCATGGTGGACCCAGATGCACCAAGTCCAAGTGATCCCAATTTAAGGGAATATCTTCATTGTAATATACCACTACTCCTTCTCTCAATATACTTCAGGTTGGTGACTGATATTCCAGCAACTACTGGGCCTACTTTCGGTCATGAGGTTGTGCCGTATGAAAATCCAAGACCAGCAATGGGGATTCATAGAATGGTGTTTGTGTTATTTCGTCAATTGGGGAGGGAGACAGTGTATGCACCAGGATGGCGCCAGAATTTCAACACTCGAGAATTTGCTGAACTTTACAATCTTGGATTGCCTGTTTCTGCTATCTATTTTAACATTCAAAGGGAGTCTGGCTCCGGTGGAAGAAGGTTATATTAA 567 0.4268 MPISSRDPLVVGRVIGDVLDPFESSFPMRVTYNNRDVTNGCEFRPSQVLNQPRITIGGDDLRNFYTLIMVDPDAPSPSDPNLREYLHCNIPLLLLSIYFRLVTDIPATTGPTFGHEVVPYENPRPAMGIHRMVFVLFRQLGRETVYAPGWRQNFNTREFAELYNLGLPVSAIYFNIQRESGSGGRRLY. 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05072 188 Pfam Phosphatidylethanolamine-binding protein 52 167 IPR008914 -
Seca10g05072 188 SUPERFAMILY PEBP-like 13 179 IPR036610 -
Seca10g05072 188 CDD PEBP_euk 27 174 IPR035810 -
Seca10g05072 188 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 65 87 IPR001858 -
Seca10g05072 188 Gene3D - 2 183 IPR036610 -
Seca10g05072 188 FunFam Terminal flower 1 3 186 - -
Seca10g05072 188 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 12 179 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05072 Seca-Chr10 116396781 116399381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05072 K16223 - gmx:100814951 320.087