Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05057 ATGATGAATGGAACACAGACTCAGTATTGGGGTGAAAGTTCAGGTTCAACTTCCCTTAGCAGTCAGCAGGATGTTGAGGATGACCAGATGATTGCTATGGTGCTATCAGAAGAGTATGCAAAATTAGATGGAGCAGTCGGTCGGCGCCTTTCCAACTTAGAACCTGTTCCTCATGTGCCCCGGATAAATTCCTTCATACCTACCATAAGTGATGCCAGTATGGATCACCAGCGTCTGCTTCAGAGGTTAAACATCTATGGTCTTTGTGAAGTTAAAGTATCTGGAGATGGAAATTGTCAGTTCCGTGCACTTTCAGATCAGCTGTTTAGGTCCCCTGAACACCACAAGCATGTTCGCAAAGAGATTGTAAAACAGCTCAAAGATCACCGTTCCTTGTATGAATGCTATGTACCAATGAAGTACAAACGATATTACAAGAAAATGGCTAAATCTGGAGAATGGGGGGACCATGTTACATTACAGGCAGCTTCTGATAAGGTTCGTAATGCTGTTTTGAAAGTTTGTTGCTTTTGTTGGATGCTACCAATTGATAACTAG 558 0.4247 MMNGTQTQYWGESSGSTSLSSQQDVEDDQMIAMVLSEEYAKLDGAVGRRLSNLEPVPHVPRINSFIPTISDASMDHQRLLQRLNIYGLCEVKVSGDGNCQFRALSDQLFRSPEHHKHVRKEIVKQLKDHRSLYECYVPMKYKRYYKKMAKSGEWGDHVTLQAASDKVRNAVLKVCCFCWMLPIDN. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05057 185 SUPERFAMILY Cysteine proteinases 73 168 IPR038765 -
Seca10g05057 185 ProSiteProfiles OTU domain profile. 88 185 IPR003323 -
Seca10g05057 185 CDD OTU_plant_OTU9-like 79 165 - -
Seca10g05057 185 Gene3D - 70 174 - -
Seca10g05057 185 MobiDBLite consensus disorder prediction 1 23 - -
Seca10g05057 185 PANTHER OTU DOMAIN CONTAINING PROTEIN 20 169 - -
Seca10g05057 185 Pfam OTU-like cysteine protease 95 168 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05057 Seca-Chr10 116147282 116150322 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05057 - - gmx:100795801 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05057 10 116147282 116150322 Seca10g05057 10 116147282 116150322 ECH