Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05055 ATGAAGAATAGAGCATATGGAATATTGAAGCAGGTGATAGCTGGTCTGAACTCAAAAACTTTGGCTCTAAAGTCCAAAACAAACGCCATCAAGGCCCGTTTGATTATATTCTCACTTTTGATGAACAAAAGGTATGTGATGAGCTCCATTTCTGACAAGTTCCAATCTTTTTTGGGCCATCACTCTCACTACCCCACCAAGGAAGAATGCTTATTGGGAGATGGTAGCAGTGACAACAACAAGTTCTCCAATCACAATGATGCACACTCCTATGAGGCTGTGTCCAATCCTAGTGAGAAGACCCAAGTAGTGTTGGAGGAAAAATATCAAAGTGGTTGTGATTGTGAGAGTTACTACATGTATGATGGAGAAGAAGATGATGGTGATGGAAAGTTTGACTCAGCAGAGGATTTGGATCTTATTGGAGGTTCTGTGATTGATTTGGTGAAGAATTCAAAGGAAGAGGCAGGGAAAGAGTTCGAAATGGAGGATGAAATTGACCACATGGCTGAACTATTTATCAAGAAATTCCGCAGGCAAATCCTCTTGCAGAAGCAAGATTCTTTGAAGAAGAGGTACCATGAAGAGCAAAATTCACCATCATCACCAACACTGTTGGCTTAA 624 0.4087 MKNRAYGILKQVIAGLNSKTLALKSKTNAIKARLIIFSLLMNKRYVMSSISDKFQSFLGHHSHYPTKEECLLGDGSSDNNKFSNHNDAHSYEAVSNPSEKTQVVLEEKYQSGCDCESYYMYDGEEDDGDGKFDSAEDLDLIGGSVIDLVKNSKEEAGKEFEMEDEIDHMAELFIKKFRRQILLQKQDSLKKRYHEEQNSPSSPTLLA. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05055 207 MobiDBLite consensus disorder prediction 76 97 - -
Seca10g05055 207 PANTHER EMB|CAB67623.1-RELATED 15 195 - -
Seca10g05055 207 Pfam Cotton fibre expressed protein 163 195 IPR008480 -
Seca10g05055 207 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05055 Seca-Chr10 116128175 116128798 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05055 - - ccaj:109791419 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05055 10 116128175 116128798 Seca10g05055 10 116128175 116128798 ECH