Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05029 ATGCAAGGTTTCACAAATAGAGATGCTCTCACTACAACCATATCTTCTCGAAAAGCAACATTTTATAACACAAAGGAAGACACCTCTAATAATAATGTTATCAATGTTCACGATCTTTTTCTTGATTGTGATCGTGATTCTGTAAGCTTTTTTTTCATAATATACCTTGGGAAACCTGAAGGGCCTAGCTGTCACACAGGGTCAGAAACATGCTATAATACATCAGTTTTTGACTTGTTAAAAGAGGAAGAGGATAAAGGAGATAAATTGGCTTTAACCTCTTTGTTTGCGTCAGAGTCAAGAATCTCAGAGCGCATAGCACGGCGGTTAGAAGGAAAGTCACCGTATCCATGGACGTTGCGTAATAATCTGTTGTTGTGCTCTAAAATCAAGGAAGATGCAGATGAATTGTGCAAGTCACTAAAGTACAACTATGACAGGTTACGTAGTGCCTCAATGATGGCCGATTTACTCTATCACGGGATGGTTCTTTTGGCACTAAAAGATGTTAAAGTAGAAGAAGCTTTGCAGATTTTTCGACGGAGATATGTCCCATCTCATATTGAGGAAAAGAGAAGTTGTGTGTCCCAGAAATCGGGAGAACACTGA 609 0.3908 MQGFTNRDALTTTISSRKATFYNTKEDTSNNNVINVHDLFLDCDRDSVSFFFIIYLGKPEGPSCHTGSETCYNTSVFDLLKEEEDKGDKLALTSLFASESRISERIARRLEGKSPYPWTLRNNLLLCSKIKEDADELCKSLKYNYDRLRSASMMADLLYHGMVLLALKDVKVEEALQIFRRRYVPSHIEEKRSCVSQKSGEH. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05029 202 Pfam Phosphoribosyl-AMP cyclohydrolase 1 72 IPR002496 GO:0000105|GO:0004635
Seca10g05029 202 Gene3D - 92 183 - -
Seca10g05029 202 PANTHER HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN 1 186 - -
Seca10g05029 202 SUPERFAMILY all-alpha NTP pyrophosphatases 102 182 - -
Seca10g05029 202 Gene3D - 1 64 IPR038019 -
Seca10g05029 202 Pfam Phosphoribosyl-ATP pyrophosphohydrolase 114 182 IPR021130 -
Seca10g05029 202 CDD NTP-PPase_HisIE_like 99 177 IPR008179 GO:0000105|GO:0004636
Seca10g05029 202 SUPERFAMILY HisI-like 1 77 IPR038019 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05029 Seca-Chr10 115806115 115807816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05029 K11755 - gmx:100807276 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05029 10 115806115 115807816 Seca10g05029 10 115806115 115807816 ECH