Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g05027 ATGAGTGTGGATTCAGAAAAGAATCTTGTTTTATCAAAATCAGATGACACTTCACCAGATAAAGATGAGTATTCAAGGAAATTAAACACTCAGGATGTTTCCATTGATGAAGGAGCGCCTTTCACTTCTGGTGGTGATGTCTGGCAAGCAGTTGAAATGCCACATTCATACTATGATTCTGCTGATACTCATGAGTACTCGGCCAGTGGCTTACCAACACTGGCCAATCGTCAAGTCAATGAAGAGCAAAGAACCCATCTGATTGATCTTGAGGCTGATTTGCATCGAAAAGAGACAGGTAAAGAGTTGTTACATAGGCATTTAGATGATGGGACCTTCAGTTCTTACCAAAGCCAGGATAGGAGTGTCTTACTCCAATCGCTCTTCAAGGGAGAGGGGCTGTTACCCTATCATCATGAACAAAAAGGAGCTGAGTTAGACTTCCAGACTTCAAACAATGTTATGTTGGGGGATGGCCAATGTTCCAGTCATTTTAAGGAGTCCTTGCAAATGTCGCTAACATTGGACCAAGGGCAAAGGAGAGCTACTGAGGTTTACATGCCAGAAAGCATGTCAGAGAATGTTTACCCCAATGGAGGAAGGTATGTAATCCCCAGGCAAGATCCATTGGCTGCAGCAAATATGACTGATTGGGCTGCTAATACTGCTTGCATAGCAGCGCCTTCTCAATCTCACTTGAATACTGGAGATTTTATTGGTCATCATTGGTTCCCGGCTGACCATCAAGTCCGTGGTGGCTGGAATGGGTCTGATGGTGGTAGTCTTTCAAGTCAAAGTCTTGGTACTGGAGCAAACTCGGATCAAAGTTTATTTAGTATTCTATCACAGTGTAACCAATTACGTTCAGGTACCCCTTATGATTCAGTCAGAAATACTGACCAGTTTCTTGCACCAAGAACTTATGTAGTAGATGCAGGTACGCCCAGGGCGAATGCCATTGCACCACAGGCTTCTCATCCATTAGATTACTTATCTGGACGTGAGACACCCAGTGGTCTGGTGCCTGATGATTTGTCGTGGATGAGCTTGCCACATAAGAGAGAAGTCATTCGATTAGAGCGTGAATCCGTCATTCCAATTTTGAAGCCTAAACTCATCATGACATTGGCCAATCTTATTAAACATGGTTCCGATCGAGTTGAGTTTTTGAAGCTCTGCAAGAGAATAGAGTATACAATTCGAGCTTGGTACCATCTACACTTCGAGGACATGATGCAACTATACTCCCTCTTTGATCCTGTATCTGGGGCCCAAAAGTTGGAACAACAGGGGCTAACTTCTGAAGAAATTGATGTACATGAACAAAATTTCTTGACATACCTTTTTAAGGTCATGAAAAAAAGCAACTTCAAGATTGCAACTGAAGATGAGATTGATGTTGCACTTTCTGGAAAGTATCTTCTAAATCTTCCCATTACTGTTAATGAATCTAAGCTTGACAAGGTGCTTTTGAAAAAATATTTTGAAGCACATCACTCTGATAACCTTCCACATTTTTATGATAAGTATATTATCTTTCGGCGTGGCATTGGAATTGATCAAACAACTGATTTCTTTATCATGGAGAAAGTGGACATGCTCATAGCACGTTTTTGGGCATATCTATTAAGAAAAATTAGGTTGGAAAAGCTTTTCTTCAGAGTGTCAAAAAGGCGTAATAATAAAGATCCTAAGAAGGATGATGAAATTAACTCAGAAGATTGTCAAGATGATGTATATGAACGAATACGTCTTGAAAGTATGCCATTAAGTTGTCGTAATTTGCTGGGCAAGACCACAATCCAAGAACCTACATTTGATAGGATAATTGTTGTCTACAGGCGAGCCAGTTCCAATTCAAAACCAGAACGAGGAATTTTTGTGAAGCATTTCAAAAACATTCCGATGGCTGATATGGAAATAGTTCTTCCAGAAAAGAAAAATCCTGGATTGACTCCAATGGACTGGGTGAAGTTTCTTGGATCTGCTATAGTTGGGTTGGTTGCTGTAGTTAGTTCCATTCACGTGGATAAGGTTGATTTGCATATTATTGGCGCAATTCTCTCCACAGTAGTTGGTTATTTTGTTAAGACATACTTCACGTTTGAACAAAACTTGGCTGCATATCAAAATTTGATTACACAATCAATGTATGACAAGCAATTGGACAGTGGAAAGGGTACGCTTCTCCATTTATGTGACGATGTCATTCAACAAGAAGTCAAAGAGGTAATAATAGCATTCTTTATTCTGATGGAACAGGGAAAAGCTACAAGACAGGATCTTGATCAATGGTGTGAAGAACTAATCAGAGATGAGTTTAATGAGACCTGTAATTTTGACGTAGATGATGCTATTGAGAAACTAGAGAAGCTGGGAATTGTTACACGGGATACCATTGGCCGGTATCAAGTTGTTGGGCTGAAACGGGCCAATGAGATAATTGGCACTACCACTGAAGAGCTTGTCCTTAAGGCAAAAGAAGGAAACATCACTCCTTGA 2502 0.4041 MSVDSEKNLVLSKSDDTSPDKDEYSRKLNTQDVSIDEGAPFTSGGDVWQAVEMPHSYYDSADTHEYSASGLPTLANRQVNEEQRTHLIDLEADLHRKETGKELLHRHLDDGTFSSYQSQDRSVLLQSLFKGEGLLPYHHEQKGAELDFQTSNNVMLGDGQCSSHFKESLQMSLTLDQGQRRATEVYMPESMSENVYPNGGRYVIPRQDPLAAANMTDWAANTACIAAPSQSHLNTGDFIGHHWFPADHQVRGGWNGSDGGSLSSQSLGTGANSDQSLFSILSQCNQLRSGTPYDSVRNTDQFLAPRTYVVDAGTPRANAIAPQASHPLDYLSGRETPSGLVPDDLSWMSLPHKREVIRLERESVIPILKPKLIMTLANLIKHGSDRVEFLKLCKRIEYTIRAWYHLHFEDMMQLYSLFDPVSGAQKLEQQGLTSEEIDVHEQNFLTYLFKVMKKSNFKIATEDEIDVALSGKYLLNLPITVNESKLDKVLLKKYFEAHHSDNLPHFYDKYIIFRRGIGIDQTTDFFIMEKVDMLIARFWAYLLRKIRLEKLFFRVSKRRNNKDPKKDDEINSEDCQDDVYERIRLESMPLSCRNLLGKTTIQEPTFDRIIVVYRRASSNSKPERGIFVKHFKNIPMADMEIVLPEKKNPGLTPMDWVKFLGSAIVGLVAVVSSIHVDKVDLHIIGAILSTVVGYFVKTYFTFEQNLAAYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIIAFFILMEQGKATRQDLDQWCEELIRDEFNETCNFDVDDAIEKLEKLGIVTRDTIGRYQVVGLKRANEIIGTTTEELVLKAKEGNITP. 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g05027 833 Pfam Protein of unknown function (DUF3754) 606 727 IPR022227 -
Seca10g05027 833 PANTHER AMINOPEPTIDASE (DUF3754) 335 828 - -
Seca10g05027 833 MobiDBLite consensus disorder prediction 1 36 - -
Seca10g05027 833 MobiDBLite consensus disorder prediction 9 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g05027 Seca-Chr10 115770061 115783312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g05027 - - tpra:123908934 1278.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g05027 10 115770061 115783312 Seca10g05027 10 115770061 115783312 ECH
Seca10g05027 10 115770061 115783312 Seca2g03394 2 104739246 104745566 PCT