Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04946 ATGACACTGATGACAGTGAAGGCAAGCTCTAATCACCATCCTTTTGGTCCTATTTCTGAAGCTATTCATAAATACCATCTGAATCATTTTTGTTTCCTTTTGTTGTTGCAGTACTTCTGTATGGTGATGAGGATCAATATTGACTGCAATGGTTGTTACAGAAAAGTGAAGAGAGCCCTTCTTGATATGCCAGAGTTAGAGAGCCATCTCCTAGAGAAGAATCAGACAAGGGTAATAGTGTGTGGAAGGTTCATCCCACAAGATGTTGCAATCAAGATAAAGAAAAAGACTAACCGAAGAGTTGAGATATTGGACATACAAGACTTAAGCGACAACAGTGCTGCTGAAATGGAAGAACAGAAACCAGCAATGAGTAATAATTGGACTCTTCTAGCAACCCAGAATCAAATGGAAACCTGTTTCAACAAAGAACTTCCCTGTATTTAA 447 0.387 MTLMTVKASSNHHPFGPISEAIHKYHLNHFCFLLLLQYFCMVMRINIDCNGCYRKVKRALLDMPELESHLLEKNQTRVIVCGRFIPQDVAIKIKKKTNRRVEILDIQDLSDNSAAEMEEQKPAMSNNWTLLATQNQMETCFNKELPCI. 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04946 148 Gene3D - 40 111 - -
Seca10g04946 148 SUPERFAMILY HMA, heavy metal-associated domain 41 100 IPR036163 GO:0046872
Seca10g04946 148 PANTHER OS08G0431150 PROTEIN 21 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04946 Seca-Chr10 113998158 113999031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04946 - - gmx:100799970 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04946 10 113998158 113999031 Seca10g04946 10 113998158 113999031 ECH