Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04939 ATGGTGCGCCGCAAGCGCGGAAGTTTTCCACCGGAAAATTCAAGCGATGGCTATCCATCAAAGAGGAGAAGATATTCTCGGTTCGAATCTTCGGGTTCTAATCGCGGAGTGTGTTCTAGGAGATGGGTTTCCTCTTCCAAAGATTCTTCTAGTTGCACAGATAAGATTGTTGTTGCTTCATACAATATACTAGGTGTTGAAAATGCATCAAAGCATCCAGATTTGTATTCTAATATTCCGCGAAGGTTCTTGGAGTGGGACTGGCGGAAAAAGCTCATACTTGAAGAGATTAATAGCTACAATGCAAGCATACTATGTTTCCAGGAGGTTGATCATTTTGATGATTTGGATGATCTTTTCCAGAACAATGGCTTTAAGGGTGTTTACAAAGCTCGCACAGGAGAAGCACATGATGGATGTGCTGTATTTTGGAAGGACAAATTATTTAATCTGTTGCATCAAGAAGATATAGAGTTCCAGAGATTTGGCCTGCGTAACAATGTTGCTCAACTTTGTGTTTTGGAGGTAAACCATGATAGACCAGAATCCGACACATGTAAACTAACAGCTGTGGCACCATCTGCTGGAAAAAGAAGATTTGTAATAGGGAATATACATGTGTTGTTCAACCCAAATCGAGGTGACATCAAACTGGGCCAGGTCAGACTTTTACTTGATAAAGCTTACGAGTTATCACAAGAATGGGGCAACATCCCTGTTATTATTGCTGGGGATTTAAATAGTGTTCCTCAGAGTGCAATATATAAATTTCTATCTTCATCCAAGGTGAGTTTGGCATCTCCTCATCATGTATATTCTCAAGCCTCTTAG 831 0.4055 MVRRKRGSFPPENSSDGYPSKRRRYSRFESSGSNRGVCSRRWVSSSKDSSSCTDKIVVASYNILGVENASKHPDLYSNIPRRFLEWDWRKKLILEEINSYNASILCFQEVDHFDDLDDLFQNNGFKGVYKARTGEAHDGCAVFWKDKLFNLLHQEDIEFQRFGLRNNVAQLCVLEVNHDRPESDTCKLTAVAPSAGKRRFVIGNIHVLFNPNRGDIKLGQVRLLLDKAYELSQEWGNIPVIIAGDLNSVPQSAIYKFLSSSKVSLASPHHVYSQAS. 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04939 276 Gene3D Endonuclease/exonuclease/phosphatase 31 276 IPR036691 -
Seca10g04939 276 MobiDBLite consensus disorder prediction 1 38 - -
Seca10g04939 276 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 44 270 - -
Seca10g04939 276 Pfam Endonuclease/Exonuclease/phosphatase family 59 257 IPR005135 GO:0003824
Seca10g04939 276 SUPERFAMILY DNase I-like 47 269 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04939 Seca-Chr10 113701556 113707071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04939 - - gmx:100777474 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04939 10 113701556 113707071 Seca10g04939 10 113701556 113707071 ECH