Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04922 ATGAAGAGCAATTCAGAGTCATCTCTCCTTTCTGCTATGAGATCTTCTAGAGGTGAGAAGATTCTCGAACTTGATGGAACAGTCACCACACAGCCGGTCCTTGAGCATGTAGGAATATCTACCTGGCCTGGAAGGTTAATCCTGACAGATCATGGACTTTATTTTGAAGCACTTCGTGTTGTGTCATATGACAAACCAAAAAGATATGATTTATCAGAGGATCTAAACCAAGTTGTTAAACCTGAGTTGACTGGACCATGGGGTACTCGACTTTTTGATAAGGCAGTCTTCTATAGCTCAGTCTCCTTATCAGAACCAGTTGTACTAGAATTTCCAGAGCTTAAAGGTCATGCTCGTCGTGATTATTGGCTAGCTATCATCCAAGAGATTCTTAATGTTCACAAATTCATAAGCAAGTATAGACTTAAAGGGGTTGCACGGGAAGAAGCACTTTGGAAGGCTGTTTTAGGAATCTTGCGTTTACAAGCCATCCAAGATGTTAGTTCTGCAATCCCTATACAGAATGATTCTCTTCTCATGTTTAATTTATGCGATCAGCTTCCAGGAGGAGACTTGATATTAGAAGCCCTTGCAAATATGTCAAATTTAAGGGAGTCAGATCATGGCAATGATTTCAGGGCTGGAAGTGGAATGTATTCTATCTCGGTCTCAGACATGGTTTCTAACTTGGGATTTGCATTTGGAACAAGTTCAAACAACTCAAATGAGAGCAGGATTGCCGTGGGTGAAATATCTGTTGGAGAAATGACTTCATTGGAAATAGCGGTTAAAGAATCTAAGAACAATTATAAAAAGGTCGTATCTGCACAAGCGACAGTTGATGGTGTTAAAGTTGATGGTGTTGACACTAATTTGGCTGTCATGAAGGAGTTACTTTTTCCTCTAAATGAACTTTGGAAGTCTCTTCAATCTATGGCATATTGGGATGATCCTTGGAAGTCTTCTGGGTTTTGTTTGTTCTTCAGTTACATCATCTACAGGGGTTGGCTTGGCTATGCGGTGGCACTGGTTCTTGTGTTACTTGCAGTTTTTATGATAATTACCCGATGTTTTAGCCAAGGTAGGCCTGTTCCTGAAGTTAAAGTAATAGCCCCTCCACCAATGAATACAATGGAACAGCTTTTGGCTGTTCAGAATGCTGTCTCTCAAGCTGAACAGGTCATACAGGATGGTAACATAGTTCTGCTCAAGTTCCGCGGCTTGTTGCTGTCCATTTTTCCTCAGGCCACAGAGAAGTTGGCCTTTGGTCTTCTATCAGCAGCCTTGATTTTGGCTCTCTTGCCTAGTAGATACATAGCTCTGCTTGTTTTCTTGGAGATATTTACAATGTATTCACCTCCAAGGAAAGCTAGCACAGAGAGATGGAAGAGGAGATTGAGGGAATGGTGGTTCAGCATACCAGCAGCTCCTGTTACACTTGAAAGAGATAAAGAGGAAAAGAAGAGAAAGTGA 1473 0.4134 MKSNSESSLLSAMRSSRGEKILELDGTVTTQPVLEHVGISTWPGRLILTDHGLYFEALRVVSYDKPKRYDLSEDLNQVVKPELTGPWGTRLFDKAVFYSSVSLSEPVVLEFPELKGHARRDYWLAIIQEILNVHKFISKYRLKGVAREEALWKAVLGILRLQAIQDVSSAIPIQNDSLLMFNLCDQLPGGDLILEALANMSNLRESDHGNDFRAGSGMYSISVSDMVSNLGFAFGTSSNNSNESRIAVGEISVGEMTSLEIAVKESKNNYKKVVSAQATVDGVKVDGVDTNLAVMKELLFPLNELWKSLQSMAYWDDPWKSSGFCLFFSYIIYRGWLGYAVALVLVLLAVFMIITRCFSQGRPVPEVKVIAPPPMNTMEQLLAVQNAVSQAEQVIQDGNIVLLKFRGLLLSIFPQATEKLAFGLLSAALILALLPSRYIALLVFLEIFTMYSPPRKASTERWKRRLREWWFSIPAAPVTLERDKEEKKRK. 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04922 490 PANTHER HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED 1 488 - -
Seca10g04922 490 Pfam Plant protein of unknown function (DUF639) 256 484 IPR006927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04922 Seca-Chr10 113398337 113406520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04922 - - gmx:100803163 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04922 10 113398337 113406520 Seca10g04922 10 113398337 113406520 ECH