Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04897 ATGGGTAATGAAGTGCAACATTCTCCATTAGTTGCTAAGCTTTTAATCTTCACACACTTCTCCAATCTTCTTAATTTTCTTTTCTTCCTAATAGGCCTTTCACTAGGTGTCACAATCTGTGTATACTTAAACAGCTTATCTTTGAACCAACAAGGACTGTTATATTTATCACCACCAGCTCCACCCCCAATATTGCAAATTAATCCTCTGCCAACATTACCCACAACACCAGCTCAACAAAATCCTAGTGAATATGCACCAAATATTCAGCAGCTTCTCATGCATACTATGGATGATGAGGAATTGTTCTGGAAAGCATTAATGGTTCCAAAGAGAAACAAATTCCCAGGTGAGCATGTACCTAAGATAGCTTTCATGTTCTTGACAAAGGGACCCATACCTCTGGCCCCTTTGTGGGAGATGTTCTTCAAAGGGCATGCAGGGCTTTATACAATCTATGTCCATACTCATCCTTCATACAATTGGTTAGTAGCTGAGGATTCTGTCTTCTATGGAAGAATCATTCCAAGTAAGCCAGTAGAATGGGGAAGACCCTCAATGGTTGATGCAGAGAGGCGCCTATTAGCAAATGCGCTCCTTGACTTCCACAATGATAGATTTGTGTTACTCTCTGATAGCTGCATTCCTTTATTCAACTTCACAACAATATACAACTACTTGCTTAGTGTCAATGAGAGTTTTGTAGCCTCATATGATGAGCCAAGAAAAGTTGGACATGGCAGATACAACCCCAAAATGGCACCTACAATATCTATTTCTGATTGGCGTAAAGGGTCTCAATGGTTTGAGGTCAATAGGAAGGTAGCAATTGAGATTGTCTCAGACAAGAAATTCTATCCCATCTTCAGTGAGCATTGCAACCCCCCATGTTACATGGATGAGCACTATATCCCTACATTGGTTAATAAATGTTACCCAAAAGAGAACTTGAATAGGAGCATAACTTGGGTTGATTGGTCCAAGAGTGGTCCACACCCTGGAAGATTTGGCAGGTCTGTTATCTCAATTGGGTTTCTGAATCAAATAAGGTTTAGTGGTAATTCCAATGCTACTTCCATTTGCTTTCTGTTTGCCAGAAAGTTCATGCCAGATACTCTGCATCCTTTGCTGCGGATTGCAAATGAGCTAGCTACTTGGCCTTAA 1164 0.4064 MGNEVQHSPLVAKLLIFTHFSNLLNFLFFLIGLSLGVTICVYLNSLSLNQQGLLYLSPPAPPPILQINPLPTLPTTPAQQNPSEYAPNIQQLLMHTMDDEELFWKALMVPKRNKFPGEHVPKIAFMFLTKGPIPLAPLWEMFFKGHAGLYTIYVHTHPSYNWLVAEDSVFYGRIIPSKPVEWGRPSMVDAERRLLANALLDFHNDRFVLLSDSCIPLFNFTTIYNYLLSVNESFVASYDEPRKVGHGRYNPKMAPTISISDWRKGSQWFEVNRKVAIEIVSDKKFYPIFSEHCNPPCYMDEHYIPTLVNKCYPKENLNRSITWVDWSKSGPHPGRFGRSVISIGFLNQIRFSGNSNATSICFLFARKFMPDTLHPLLRIANELATWP. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04897 387 Pfam Core-2/I-Branching enzyme 123 350 IPR003406 GO:0016020|GO:0016757
Seca10g04897 387 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 41 377 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04897 Seca-Chr10 113159947 113161746 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04897 - - qlo:115962473 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04897 10 113159947 113161746 Seca10g04897 10 113159947 113161746 ECH