Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04760 ATGAGATTGAGAACGGCTTCCTCTCTTCTCTGCAGGTCCCTCGCCGCCGCTCGCGCCGGTTCCGCCGCCTCATTCGCCGTCCCTAACCGTTTTCTCCAGGCGGCTCTCTACGGCACCACCACCGGCGGCGCCCACACTCGCCGCCGATGGTTCTCTTATCTCCTCGGTCCAATCACCGGAGCGTCTCTCGGCGTGGCCGGAGCTCTGTTCACTGCCGCCTCCATCTCTCAGGAAGCCCTCGCCAAGGAGCCGCCGCCGCCCGCCGCTCTCCCGAAAGAAGTCGTTCTTTACCAGTACGAGGCTTGCCCTTTCTGCAACAAAGTCAAAGCATTTCTGGACTACTATGATATACCTTACAAAGTTGTGGAGGTCAACCCACTCAGCAAGAAAGAAATCAAATGGTCTGAGTATCAGAAGGTGCCAATATTAATGGTAGATGGCGAGCAGCTAAATGACTCGTCAGCTATAATTGATGAGCTGGGATACAAGATTCTGTCAAAGAAAAAGGGACGTTCAACCTCTGAGGATGATGAAGAGACAAAATGGAGGCGGTGGGTTGATAATCATTTGGTACATGTTCTGTCACCTAACATATATCGAAATACTTCTGAAGCGCTTGAGTCCTTTGACTATATTACAAGCAATGGCAATTTTGGCTTTATGGAAAAAATTTCGGTGAAGTATGCTGGAGCTGCAGCTATGTATTTTGTGTCAAAGAAACTAAAGAAGAAATATAACATTACTGATGAACGTGCTGCTCTTTATGAGGCAGCAGAAACATGGGTAGATGCTCTGAATGGCCGGGACTTCCTTGGAGGGTCGAAGCCTAACTTTGCTGACCTGGCTGTCTTTGGGGTTTTAAGACCCATACGCTATTTGAGGTCTGGCAAGGATATGGTGGAGCACACTCGTATTGGTGAGTGGTACACAAGAATGGAGAATGCCGTGGGAGAGCCTTCCAGGATTAAAGCCTAA 975 0.4964 MRLRTASSLLCRSLAAARAGSAASFAVPNRFLQAALYGTTTGGAHTRRRWFSYLLGPITGASLGVAGALFTAASISQEALAKEPPPPAALPKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPLSKKEIKWSEYQKVPILMVDGEQLNDSSAIIDELGYKILSKKKGRSTSEDDEETKWRRWVDNHLVHVLSPNIYRNTSEALESFDYITSNGNFGFMEKISVKYAGAAAMYFVSKKLKKKYNITDERAALYEAAETWVDALNGRDFLGGSKPNFADLAVFGVLRPIRYLRSGKDMVEHTRIGEWYTRMENAVGEPSRIKA. 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04760 324 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 4 323 - -
Seca10g04760 324 Gene3D Glutaredoxin 88 167 - -
Seca10g04760 324 CDD GST_C_mPGES2 175 318 IPR034335 -
Seca10g04760 324 SUPERFAMILY GST C-terminal domain-like 164 316 IPR036282 -
Seca10g04760 324 Gene3D - 172 322 - -
Seca10g04760 324 ProSitePatterns Glutaredoxin active site. 96 112 IPR011767 -
Seca10g04760 324 SUPERFAMILY Thioredoxin-like 93 189 IPR036249 -
Seca10g04760 324 SFLD Prostaglandin E synthase like 56 323 - -
Seca10g04760 324 Pfam Glutathione S-transferase, N-terminal domain 96 160 IPR004045 -
Seca10g04760 324 Pfam Glutathione S-transferase, C-terminal domain 249 314 IPR004046 -
Seca10g04760 324 ProSiteProfiles Glutaredoxin domain profile. 82 181 - -
Seca10g04760 324 SFLD Prostaglandin E synthase like.1 56 323 IPR034334 GO:0050220
Seca10g04760 324 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 92 168 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04760 Seca-Chr10 109367940 109373013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04760 K05309 - gmx:100811576 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04760 10 109367940 109373013 Seca10g04760 10 109367940 109373013 ECH