Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04745 ATGTCCCTTGAGCTCAAACTCTCTCGTTCCAATCGTATCTATCGCCCTTCGGATGCTCTGGAAGGCAAAATAATCGTCAAAACTCAGTCTTCAATTTCCCACTATGGAATTCGCCTTACTGTCAAAGGATCCGTCAACTTGCAGGTTCGTGGAGGATCAGCTGGGGTTGTTGAGTCATTCTATGGCGTTATTAAGCCCATCCCAATTGTGACAAGTCCACGTGATTCTTGTGATTGGCTTGTAAACAGGAATAGGACCGTTGAGGTTAAATCTTCTGGAAAGATTGGTTCGGGTACAAAAGAGATACCATTTTCCGTGAAGCTTAAACAACGCGATGAAAATTTAGAAAGATTTTATGAGACTTTCCATGGGGCAGATATTAGTATTCAGTATTTGGCCACTGTAGATATATCTCGTGGATACTTGCATAAATCATTATCAGCAACAACAGAGTTCATTGTTGAAAGTGATAAAGAAATTTCAGCTGATCTTCTACAAAGACCAGTTTCTCCAGAGATGGTCATCTTTTACATTACCCAAGACACTCAAAGACATCCTCTACTTCCTGAATTAAAATCTGGTGGATTTCGGGTGACAGGAAAAATCTGTACTCAGTGTTCTTTGTCTAGTCCAATTACTGGTGAGCTAACTGTAGAAGCATCCGCAGTTCCAATTCAATCAATTGACCTTCAGTTATTTCGTGTTGAGTCCATTCTTCTTGGGGAGAAAATTGTGACTGAAACCTCTCTGATTCAAACAACTCAGATAGCAGATGGAGATGTATGCCGAAATTTGACTTTGCCTATCTATGTAATTCTTCCCCGTCTTTTGACCTGTCCAACAATCTTAGCTGGTCCCTTTTCAATTGAGTTCAAAGTTGCCATTGTTATAAGCTTTCAGTCTGAGCTATCTAAATTGCATAAAAAGTCTGACTCCAGAACTCCTAGACTCTGGCTGGCAATGGAAACATTACCACTTGACTTGGTTCGGATAAAGTAA 999 0.4034 MSLELKLSRSNRIYRPSDALEGKIIVKTQSSISHYGIRLTVKGSVNLQVRGGSAGVVESFYGVIKPIPIVTSPRDSCDWLVNRNRTVEVKSSGKIGSGTKEIPFSVKLKQRDENLERFYETFHGADISIQYLATVDISRGYLHKSLSATTEFIVESDKEISADLLQRPVSPEMVIFYITQDTQRHPLLPELKSGGFRVTGKICTQCSLSSPITGELTVEASAVPIQSIDLQLFRVESILLGEKIVTETSLIQTTQIADGDVCRNLTLPIYVILPRLLTCPTILAGPFSIEFKVAIVISFQSELSKLHKKSDSRTPRLWLAMETLPLDLVRIK. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04745 332 Gene3D - 202 309 IPR014752 -
Seca10g04745 332 FunFam Down syndrome critical region protein 3 1 157 - -
Seca10g04745 332 FunFam Vacuolar protein sorting-associated protein 26 199 306 - -
Seca10g04745 332 Gene3D - 2 157 IPR014752 -
Seca10g04745 332 Pfam Vacuolar protein sorting-associated protein 26 9 297 IPR028934 GO:0006886
Seca10g04745 332 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 9 308 IPR028934 GO:0006886
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04745 Seca-Chr10 109054751 109059958 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04745 K25730 - gmx:100820593 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04745 10 109054751 109059958 Seca10g04745 10 109054751 109059958 ECH