Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04744 ATGATGGAGAAGAAGGGTTATCCTGGGGATATCACTGTGACTGCAACTTACACACTCACCTCAAGCACTACTCTGAGGCTTGAAATGGAAGGAGTGCCAAAGAACAAGCCCACCATAATTAACTTAGCTCAGCATACCTACTGGAACTTAGCTGGTCACAACTCAGGGAATATACTTGACCATTCAATTCAGATATGGGCTAATCATATTACTCCTGTGGATCAGAATACTGTGCCAACTGGTGAAATCATGCCAGTGAAGGGTACCCCTTTTGATTTTACAACTGAGAAGAGAATAGGAAACACCATTAATCAGGTTGGAATGGGATATGACCACAATTATGTGCTTGATTGTGGAGAAGAGAAAGCAGGTTTGAGACATGCTGCAAAAGTGAAGGACCCATCAAGTTCAAGGGTACTAAACTTGTGGACAAATGTCCCTGGTGTGCAATTTTACACAGCAAACTATGTTAATGGTGTCACTGGAAAAGGAGGTGCTGTGTATGAAAAGCATGCTGGGTTATGTTTGGAGACACAGGGATTCCCTAATGCCATAAACCAGCCAAATTTCCCATCAATTGTGGTTCGACCTGGTGAAAAGTATCAACACACCATGTTGTTTGAGTTTTCAATTGAGTGA 639 0.4225 MMEKKGYPGDITVTATYTLTSSTTLRLEMEGVPKNKPTIINLAQHTYWNLAGHNSGNILDHSIQIWANHITPVDQNTVPTGEIMPVKGTPFDFTTEKRIGNTINQVGMGYDHNYVLDCGEEKAGLRHAAKVKDPSSSRVLNLWTNVPGVQFYTANYVNGVTGKGGAVYEKHAGLCLETQGFPNAINQPNFPSIVVRPGEKYQHTMLFEFSIE. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04744 212 CDD galactose_mutarotase_like 6 209 IPR047215 GO:0016853
Seca10g04744 212 Gene3D - 2 212 IPR014718 GO:0030246
Seca10g04744 212 Pfam Aldose 1-epimerase 4 207 IPR008183 GO:0005975|GO:0016853
Seca10g04744 212 PANTHER ALDOSE-1-EPIMERASE 4 211 - -
Seca10g04744 212 SUPERFAMILY Galactose mutarotase-like 5 210 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04744 Seca-Chr10 109051321 109052314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04744 4 210 Miscellaneous Gene Families AT3G47800 55.072 1.29e-77 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04744 K01785 - gmx:100776238 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04744 10 109051321 109052314 Seca10g04744 10 109051321 109052314 ECH