Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04697 ATGTCTTTGCTTTCAGATCTCATTAACCTCAACCTTTCAGAAACCACCGAAAAGATTATTGCTGAGTACATATGGGTTGGTGGATCTGGTATGGATATCAGAAGCAAAGCCAGGACTCTTCCTGGACCAGTTAGTGACCCTGCAAAACTTCCCAAGTGGAACTATGATGGGTCTAGCACAGATCAAGCTCCTGGTGATGATAGTGAAGTCATCCTATACCCTCAAGCTATTTTCAGGGACCCATTTAGGAGAGGCAATAATATTCTTGTGATTTGTGATGTTTACACCCCAGCTGGAGAGCCACTTCCAACAAACATGAGATATGATGCTGCCAAAATTTTCAGTCAACCTGATGTTGTTGCTGAGGAACCATGGTATGGAATTGAGCAAGAGTATACATTGTTGCAGAAAGATATAAATTGGCCACTTGGGTGGCCAATTGGTGGGTTTCCTGGACCACAGGGCCCTTACTACTGTGGTATTGGTGCTGATAAAGCCTATGGCCGTGACATTGTAGATGCACATTACAAAGCTTGTCTTTATGCTGGCATTAACATTAGTGGCATCAATGGAGAGGTTATGCCTGGCCAGTGGGAATTCCAAGTTGGCCCTTCTGTTGGTATCTCAGCTGGTGATGAGTTATGGGCTGCTCGCTACATTCTAGAGAGGATTACTGAGATAGCTGGAGCAGTTGTTACATTTGATCCCAAGCCTATTCAGGTTAGAAATGTCCTTGACTTTTTTTAA 747 0.4378 MSLLSDLINLNLSETTEKIIAEYIWVGGSGMDIRSKARTLPGPVSDPAKLPKWNYDGSSTDQAPGDDSEVILYPQAIFRDPFRRGNNILVICDVYTPAGEPLPTNMRYDAAKIFSQPDVVAEEPWYGIEQEYTLLQKDINWPLGWPIGGFPGPQGPYYCGIGADKAYGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDELWAARYILERITEIAGAVVTFDPKPIQVRNVLDFF. 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04697 248 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 19 99 IPR008147 GO:0004356|GO:0006542|GO:0006807
Seca10g04697 248 PANTHER GLUTAMINE SYNTHETASE 3 240 - -
Seca10g04697 248 Pfam Glutamine synthetase, beta-Grasp domain 21 97 IPR008147 GO:0004356|GO:0006542|GO:0006807
Seca10g04697 248 Gene3D - 1 103 IPR036651 GO:0004356|GO:0006542|GO:0006807
Seca10g04697 248 SMART Gln_synt_C_2 103 248 IPR008146 GO:0004356|GO:0006807
Seca10g04697 248 FunFam Glutamine synthetase, chloroplastic 1 103 - -
Seca10g04697 248 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 104 244 - -
Seca10g04697 248 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 106 248 IPR008146 GO:0004356|GO:0006807
Seca10g04697 248 SUPERFAMILY Glutamine synthetase, N-terminal domain 13 102 IPR036651 GO:0004356|GO:0006542|GO:0006807
Seca10g04697 248 Pfam Glutamine synthetase, catalytic domain 167 241 IPR008146 GO:0004356|GO:0006807
Seca10g04697 248 ProSitePatterns Glutamine synthetase signature 1. 55 72 IPR027302 -
Seca10g04697 248 SUPERFAMILY Glutamine synthetase/guanido kinase 104 240 IPR014746 GO:0003824
Seca10g04697 248 FunFam Glutamine synthetase 104 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04697 Seca-Chr10 107896470 107900403 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04697 K01915 - gmx:100817922 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04697 10 107896470 107900403 Seca10g04697 10 107896470 107900403 ECH