Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04560 ATGGAGGGATTAAGGCCAGCGTGGGCTGTCAAAGCTATCATCGTGATCGTATTCACTTCCATTCTCTTCCGATGCGTCTGCGGTATTAACCACACCGTCGGTGGAGCTTCCGGCTGGGATCTCCGTTCAAATATCCAGGCCTGGTCTTCTATGACCACGTTCAGTGTTGGTGATGATCTTCTTTTCTCATACACGCCGGTTCATGATGTGGTGGAAGTTAACCAACAAGGTTATGACACGTGTACGATCGTCAATGCCTTGGCCACGTACGACAGTGGAGACACCGTGATCCACCTTAAGGAACCGGGAAACCGCTACTTTATCTGTGGCCGAATGGGCCACTGTCAACAAGGGCTTAAACTCCAAGTCCAAGTTCTAGCCCAGTCCAACAACAACGGAACCAATGAAGGCAGAGGACGTTCGGCTCATCCACCTGAAGATATTGACGACCCAGCACCTGCGAACGGGCCATGCGATTGTTCCCGTGCTGAAGAGAGCCATGAGCCGATGCCATTGATTACGCTCGTAATCATCCTCGCTTTCACTCGCGCTCCTTTCTTCTTTGCCTTTTCGAATCTCTCCGGTTATACTTGA 594 0.5101 MEGLRPAWAVKAIIVIVFTSILFRCVCGINHTVGGASGWDLRSNIQAWSSMTTFSVGDDLLFSYTPVHDVVEVNQQGYDTCTIVNALATYDSGDTVIHLKEPGNRYFICGRMGHCQQGLKLQVQVLAQSNNNGTNEGRGRSAHPPEDIDDPAPANGPCDCSRAEESHEPMPLITLVIILAFTRAPFFFAFSNLSGYT. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04560 197 Pfam Plastocyanin-like domain 43 118 IPR003245 GO:0009055
Seca10g04560 197 CDD Phytocyanin 30 125 - -
Seca10g04560 197 Gene3D - 28 131 IPR008972 -
Seca10g04560 197 MobiDBLite consensus disorder prediction 130 163 - -
Seca10g04560 197 FunFam Blue copper 27 131 - -
Seca10g04560 197 SUPERFAMILY Cupredoxins 29 126 IPR008972 -
Seca10g04560 197 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Seca10g04560 197 PANTHER BLUE COPPER PROTEIN 29 137 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04560 Seca-Chr10 103931537 103932626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04560 13 130 Miscellaneous Gene Families AT2G32300 42.857 3.71e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04560 - - gmx:102664120 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04560 10 103931537 103932626 Seca10g04560 10 103931537 103932626 ECH