Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04529 ATGGTCGTCGCCACCTCCAAATCTGCTTCATCACCAATGGCGCAAGATCTGCTTCACTCCTTTTCCCTCCCGAAAACCCTAAAGCTCAAAACCAAACAACAAGAACTCCTGATCCGTGTAAGCGCACTGTGCCTCATCTACATCCTCGCCTTCATCACGCGTCTCTTCAGCGTTCTTCGATATGAGTCCATGATCCATGAATTCGATCCTTACTTCAACTACCGCACTACGCTTTACCTCACCAACCATGGCTTCGCCGAGTTCTGGAACTGGTTCGACTCGGATTCATGGTATCCACTCGGACGCATCATCGGCGGCACTCTCTACCCCGGTCTCATGCTCACCGCCGCCGCGCTTTACAAAATCCTCCGATTCCTCCGATTCGCCGTTCACATCCGTGAGGTCTGCGTCCTAACGGCACCGTTTTTCGCATCCAACACTGCAATCGTCGCCTACTTCTTCGGCAAAGAGGTTTGGGATTCCGGTGCAGGACTCGTCGCCGCCGCGCTCATCGCGATTTGCCCTGGCTATATCTCGCGTTCCGTCGCTGGATCCTATGATAACGAGGGTGTTGCCATTTTTGCCTTGCTTCTCACGTTTTACCTGTTCGTGAAAGCGGTGAACACTGGATCGCTTGCGTGGTCCCTGGCTTCGGCTTTTGGGTATTTCTATATGGTTTCGGCATGGGGTGGTTATGTTTTTATTATTAATTTGGTGCCGCTTTATGTGTTGGTGCTGTTGGTGACGGGGAGGTACTCGTTGAGGCTTTATGTGGCTTATAATTGCATGTATGTGTTGGGAATGCTCCTTGCCATGCAGATTAGGTTTGTGGGGTTCCAGCATGTTCAGTCTGGGGAGCACATGGCTGCTATGGGCGTGTTTTTCTTGCTTCAGGTGTTTTTCTTCTTGGATTGGGTAAGGCATTTGCTTGGTGATGCAAAATTATTTCAAGCATTTTTGAGGATCACTGTAACTGGTGCAGTCACTGTTGGTGCTGTTGCCTTGGGAGTAGGCACAGCATCTGGTTATATATCTCCATGGACAGGAAGGTTTTACTCCCTTCTTGATCCGACATATGCTAAGGATCACATTCCAATTATTGCATCTGTCTCTGAGCATCAGCCAACTGCTTGGTCATCCTTCATGTTTGATTTCCATATCTTGCTGTTCCTTTTCCCTGCTGGGCTATATTTTTGCTTCAAGCGATTGTCAGATGCTACAATCTTCATAGTTATGTATGGTCTTACAAGCATGTATTTTGCCGGTGTTATGGTTCGGTTAATTCTTGTTGCTACCCCTGCTGTATGCCTCATTAGTGCTATTGCGGTTTCTGCCACTGTGAAGAATTTGACTCGGGTGGTGAGGGCCAAAAGCCAGGCTGTTCAAAGTGGTTCTGGTAAAGGAACCAGTACTGCAAAAGGTTCTTCCAAGGGTGTAGTTGATAACTCCCAGCCTTTCCAAAAGAATGGTGCTATTCTGTTACTTCTCGGTGCTTTTTATCTTCTCAGTAGATATGCTATTCACTGTACTTGGGTCACATCAGAGGCTTACTCATCTCCCTCGATTGTCTTGGCTGCAAGGGGTGCCCATGGCAACAGGGTCATATTTGATGATTATCGTGAGGCTTACTTTTGGCTTCGCCAGAACACTCCACCAGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACAGTTATTGTTGACAATAACACCTGGAACAATACACACATAGCAACTGTTGGGCGTGCAATGTCGTCTTATGAGGATGAGGCTTATGACATAATGAGATCGCTTGATGTTGACTATGTATTAGTCGTGTTTGGTGGTGTCACTGGTTATTCTTCTGATGATATTAATAAATTTCTGTGGATGGTGAGAATTGGTGGTGGAGTTTTTCCTGTAATAAAGGAACCTGATTACCTTGTCAATGGAGAATATCGTGTAGATAAAGGAGCAGCTCCCAAGATGTTGAACTGTCTTATGTACAAGCTGTCTTATTATCGGTTTGGGGAGCTAACTACAGAATATGGCAAACCACCTGGCTATGATCGCGCTAGAGGTGTTGAAATTGGAAATAAGGACATTAAGCTGGAGTACTTGGAAGAGGCGTTCACTACCCAAAATTGGATTGTTCGTATTTATAAAGTGAAACCACCTAAAAACAGGTGGTAA 2199 0.462 MVVATSKSASSPMAQDLLHSFSLPKTLKLKTKQQELLIRVSALCLIYILAFITRLFSVLRYESMIHEFDPYFNYRTTLYLTNHGFAEFWNWFDSDSWYPLGRIIGGTLYPGLMLTAAALYKILRFLRFAVHIREVCVLTAPFFASNTAIVAYFFGKEVWDSGAGLVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWSLASAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGRYSLRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVRHLLGDAKLFQAFLRITVTGAVTVGAVALGVGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTRVVRAKSQAVQSGSGKGTSTAKGSSKGVVDNSQPFQKNGAILLLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW. 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04529 732 FunFam dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A 534 686 - -
Seca10g04529 732 Gene3D - 535 685 - -
Seca10g04529 732 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 24 731 IPR003674 GO:0004576|GO:0006486|GO:0016020
Seca10g04529 732 Pfam Oligosaccharyl transferase STT3 subunit 43 518 IPR003674 GO:0004576|GO:0006486|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04529 Seca-Chr10 103425466 103432095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g04529 6 731 Miscellaneous Gene Families AT1G34130 86.520 0.0 1278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04529 K07151 - gmx:100780916 1333.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04529 10 103425466 103432095 Seca10g04529 10 103425466 103432095 ECH