Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04527 ATGAGAGAGCACATGGCATTTGCTAATGCTGCAGCGATCGGTCCCTCTCTGTATGGCGTTGCTCGCATCAGTTACTGTGACACAAAGGCTCCCCTCTTGGGTTCCCATGGCGAAGTGGGTTCTGGGTTCTGCAATTCCGCGTTTTTCGTTGGGTCCCATGCGGGGAAGAGTGATGTTGTGCTTGAAAGGAGGAAGTTGAAGTCAGTTGATACTAACCCCCGCATTGTTGAAAATGCCCAGATGAAATCCACTGTTGAAATCCCAGTTTCTTGCTACCAGCTTATTGGTGTCCCTGATCGAGCTGAGAAAGATGAAATTGTTAAGGCAGTTATGAGCTTGAAAAATGCAGAAATTGAAGAAGGTTACACAATGGATGTTGTTGCATCTCGCCAGGATCTTCTGATGGATGTTAGGGATAAGCTCCTTTTTGAGCCAGAATATGCTGGTAACCTGAAGGAAAAGATTCCCCCTAAATCTTCCCTTCATATTCCTTGGTCTTGGTTGCCTAGTGCTCTATGCCTTCTTCAAGAGGTTGGAGAATCAAAGCTTGTGCTGGACATTGGACGGACAAGCCTTCAGCATCAAGATGCCAAGCCATATACAGATGATTTGGTCCTTTCTATGGCTCTGGCTGAGTGTGCAGTTGCGAAGATTGGCTTTGAGAAGAAAAAAGTATCTCAAGGTTTTGAAGCTCTTGCTCGTGCCCAGTGTCTTTTAAGAAGTAAACCATCTCTTGCAAAAATGACACTGCTATCTCAGATCGAAGAATCTCTTGAAGAGCTTGCACCTGCTTGCACCTTGGAACTACTGAAATTGCCCAATACCCCTGAGAATGTTGATCGAAGACGAGGAGCAATTGCGGCTTTGCGTGAATTGCTTAGACAGGGTCTTGATGTTGAAGCTTCATGCCAAGTACAGGATTGGCCTTCCTTTCTAAGCCAAGCATTTGACAGTTTACTGGCTAATGAGATAGTTGATCTTCTTCCTTGGGATAGCTTAGCTACAATGCGGAAGAATAAGAAGACAATTGAATCACAGAATTTAAGGGCAGTAATTGATTCAAACTGTTTCTATAGAGTTTTTACAGCTCATATGGCACTTGGGTTTTCCAGCAAGCAAAAAGAGTTGATTAACAAAGCGAAAAGCATATGTGAATGTTTGATAGCTTCAGAGGGCATTGATCTGAAATTTGAAGAAGCCTTTTGCTTATTCCTTCTTGGAGAGGGCACAGAGGCTGAGGCGGTTGAAAAGCTGAAGCAGCTTGAGCTGAACTCAAATCCAAAACACAATTCAGTCTTGGGGAAGGCAATAATGGATGCTTCTAATACAAACCCATCCTTGGTATTTCTCTTATTATCATGTTCGCTCAGGTTCTTATCTTTACCACTTGCTGAACTTGACCAGGAAATGTGGCTGAAGGATTCTGTGCTTGATTTATATCCAGATACTAAAGGTTGTTCCCCTGCTCTGGCCAATTTCTTTAATGCTCAGAAGAAATTTTCTGGTAGCAAGAATTCTAAAGGAGCTCCACAAACGTTGCCTACTATATGTCATAGACCTCTATCCTCATCTGGTTCCTTAGAACGAAGAGATTTTGAGGAACCTCGTTCATACATGAGTTCTTCTCCAAATCTAGGGTTTGCTGTCAAGCAGCTGGCTCCTACTGATTTGCAGAGTTCACTGCTGTCAGGGAAAACTGAAAATGGACTCAATCTTAGCGAGTCACCTGTTAAAGTGAAAAGGAACCTTAGCACTCATCACAATGGAATTTGGGATAGTCACTTCACTCGTGCGCCCATCTTTGAAAGAATTACACACATTACCATACTGGGTTGTATTGCATTTGCTACCATTAAGTTGTTGGGAATGAACCTAAACAAGAATTTTACTGGTTCTAACTGGGCTTTCACAAAAGCCAATGATAACATTTCTTGGACTGCAGATGCATCTGCTAACTACACTGTAGGCTCTGCTTATATTAGGCGAAGTACTATTGCCAACAAACTGAAGAGAATCCTATCAATGGTTAAGATACAGTTTTTGCACCAATCAGATGCTGGAATTCAAAGTGATTTACACACTGCTCTTACCTCGTCTTCCTCCCCTATTAATGTGTTTAGGAGGCCGATGCGTGTAGAAGAAGCAGAAACCCTTATCAGACAATGGCAAACAATCAAAGCTGAAGCTTTAGGGCCTAGCCATGAAGTTAATTGCCTAGCTGAAGTCCTTGACGAATCCATGCTTGCTCAGTGGCAAGCTCTGGCTGATGCTGCAAAAGAAAGATCTTGTCACTGGAGATTTCTTTTGCTGAAATTATCTGTCCTTAGAGCTGACATTCTATCAGATGGAAATGGGGCAGACATGGCAGAAATAGAAGCCCTTTTAGAGGAAGCAGCTGAACTTGTTGACAGTTCTCAGCAAAAGAACCCAAACTATTATAGCACTTACAAAGTTAAGTATATTGTGAAGAGGCAAGATGATGGATCATGGAAGTTCTGTGAAGGTGATATACGAACGCCCTGA 2523 0.4269 MREHMAFANAAAIGPSLYGVARISYCDTKAPLLGSHGEVGSGFCNSAFFVGSHAGKSDVVLERRKLKSVDTNPRIVENAQMKSTVEIPVSCYQLIGVPDRAEKDEIVKAVMSLKNAEIEEGYTMDVVASRQDLLMDVRDKLLFEPEYAGNLKEKIPPKSSLHIPWSWLPSALCLLQEVGESKLVLDIGRTSLQHQDAKPYTDDLVLSMALAECAVAKIGFEKKKVSQGFEALARAQCLLRSKPSLAKMTLLSQIEESLEELAPACTLELLKLPNTPENVDRRRGAIAALRELLRQGLDVEASCQVQDWPSFLSQAFDSLLANEIVDLLPWDSLATMRKNKKTIESQNLRAVIDSNCFYRVFTAHMALGFSSKQKELINKAKSICECLIASEGIDLKFEEAFCLFLLGEGTEAEAVEKLKQLELNSNPKHNSVLGKAIMDASNTNPSLVFLLLSCSLRFLSLPLAELDQEMWLKDSVLDLYPDTKGCSPALANFFNAQKKFSGSKNSKGAPQTLPTICHRPLSSSGSLERRDFEEPRSYMSSSPNLGFAVKQLAPTDLQSSLLSGKTENGLNLSESPVKVKRNLSTHHNGIWDSHFTRAPIFERITHITILGCIAFATIKLLGMNLNKNFTGSNWAFTKANDNISWTADASANYTVGSAYIRRSTIANKLKRILSMVKIQFLHQSDAGIQSDLHTALTSSSSPINVFRRPMRVEEAETLIRQWQTIKAEALGPSHEVNCLAEVLDESMLAQWQALADAAKERSCHWRFLLLKLSVLRADILSDGNGADMAEIEALLEEAAELVDSSQQKNPNYYSTYKVKYIVKRQDDGSWKFCEGDIRTP. 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04527 840 MobiDBLite consensus disorder prediction 502 527 - -
Seca10g04527 840 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 71 838 IPR044685 -
Seca10g04527 840 MobiDBLite consensus disorder prediction 502 522 - -
Seca10g04527 840 Pfam ARC6-like, IMS domain 715 832 IPR025344 -
Seca10g04527 840 Coils Coil 788 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04527 Seca-Chr10 103407346 103413900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04527 - - gmx:100801086 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04527 10 103407346 103413900 Seca10g04527 10 103407346 103413900 ECH