Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04523 ATGCATTGTGCCCTTCAAGAGATAGGTAATGATAGTCCAGAAGTTTCAGAAGCAGGAAAGGATTCCATATCAACGATATATCAGAAACAAAATAAGCTCACATCTTTGGAGGATTGTCAAGAATCTTCTCTTTCAAGGATAAACTCTGATAGTAGGTGTGCCATCCTTTCATTTCTTAATTTTGAGCCTGATGGAACCTGGAGAATTGTTGCCCTTCCAGTGCAGTGTCTCAATCACATCAACTTAGCTTCTGGCATAGATATGGATGGTCTGCAACTTCTTTTCCCTCCACCTGTTAATAGGTTGAAGATTGATCAATGTAAGGGGCCTAGAGGACCTCTGCCTCCCTATGCTTATCCGGTCAAATCATTTACAAGAAGAAGCTTTACTGGTTCAAATGTGCGTCGTCGATGTCAAAATAAGATTGCTAACAAAGCTTCTAAACTTAATGGACTCCCTGGGGATTCTTGTTCACAAAGTTCACTAGTCAACAGCCCTAGCTTGTTCCCTGATAGTTCTGCTGCAGTTAATTCATCTGATAAGTTCATAAGCAATTCCAAGGAAGACAAGTCTCTGAAGAAAAACTCAAGAAAAAGGACAAGAAAGAAAGTTAGACAGAGTAAGAAGCAGTCAAGTGACAGTGGCTCTACTGAAAGAGAAGTTCTTGCTGAGGAATATATTTGTGGTTTGACTTCTGAAACCTGCAGCAGCAATGATGTGGATAAGGAGGCTGGGCTGATGTTGTACACGACACCAGAATTTTCTTCTTCAGATGATAAATCAATAAAATTTGATTGCGAAAGGAATGGGATGAATGAAAACATCAATGTTACAGAAGCACAAAAAAGTTCCAACTCTTATATTGATGAGGCAGCTATGTCAATAGTTACTGCACCTATTGTTCATAATTCTGCTGGAGAATGTGGCATTGAATCCAAGAATCAGCTGCAAGATAGGGGCCATGATTTTGCAGTCATTGATAGAGAAACAAAGGGCATTCAACACATTGAGCTATGCTGTTTTAATGATGTACAAGACTCCTTGGTGTTGGATTCGGTTTCAATTGGTTCAAAAAGTGATGAAAGTCCCAATGCTAGTGATATAGGAAAACGATCCAACAAGGCAAGTTGCAGAATCACTTCAAATTCAGGAGATGGGTATTTTCTTGGTCAAAACTTAATGAATGGTATTGGCGGTAACTATGAAAATAATGAGGGAATTAGGCATGGTGGTCAAAATTGCATTGGCAATGATAAGAGAGTTAAGCAAAAGAGAACAATGTCGAAGAGCTCAAGTTTCAATAAAGGTGTTGGAATTTTGCACGGTCGAACTGGGAAGGAAAACAGTCATTCTGTCTGGCAAAAGGTTCAGAAGAATAGTTCTGATGAATGTGGTGGTGATTTGAAGAAAGTAAACACGACTTTGTCACATTTCGTTTCCACTGCAGAAAAGGATCCTTCAGTTATCAGAAACTGTAATTCTGTTGGTGTAAATGTTGCATCAAAACCAGAGGATAAAAAACACTTCAAAAATAAAGTTGGTAGAAAATCAAAAGGTAAAGTGGACTCAGTTTCAAAAAAAGGACACTGCAATTATTCTAGGAAGGGTTCCCATTATAACAGGACTTCGTCAAATGATAGTGTGAAGGTTAGTGTTCAGCAGAATGATACATCGCATATCTCATCTCAGGAAATTAATCAACAAGGATTGAGCAGTGTCTCTGGATTTAATTCTGATACTAATTGCCTGGTTGCCGGCTTCCAGACCAACGGAGTTGAGCAGGAAACATCTGAAATAGTTCACAGTGCACAATTTCATCTGGAGGAGTCAGATATACAGAAAAGTTCCTGCCATAGTATTGCAAACACGAAGAATGAAAATATAAACATTCACGATAGCTCATTGGTAATGCCAGGTGAGATCATCAATCAACCAAATATGTCTGAGGAGCAATCTTCTGTCTCTTATAATCTTTTAGGTGATGAAGTTGGTCAAACAGTGAAAGAAGTTTCTTCTGCAGACTACAATGCACAAAACCACAGTTCTGGATCTACCCTGTGGAAATGGATACCAATTGGGAAAAAGGATACGGGATTGGAAAAATCTGAATCTAATAGCTCGTCACCAGAATATTCTGATGAAACATCTTGTAAAAGTTTTAACTTGGAAAACAGTGTTGAGCCAAAATTAGCCCCCGTTTCTCAAAATCAGGATTCTTCACTAAATGCAAGCAGTACATGCATGGGTCAGATTTACAATGGAGTTTCTTGTCTTAATGAGGGTGAGAATCATAAATTGGGTAATGAGGTTGCATGTCCATTGGAAGAGCACAGGGACAAGCATGAAGTAGCTAATCACATGATTTGTGAATGTGAGAGTGAGAATAAAGTTATATTAGAAAATGATTCCTATAGAATAGCTCAAGCTGTGAATGATGCCTGTAAGTCACAACTAGCTTGTGATGCTGTACACATGGCCACAGGTGGTCCAGTTGCAGAGTTTGAAAGACTACTTCATTTTTGTAGTCCTGTTATTTGTCAATCATCCAATTCACTCAGTTGTTTGACCTGCTCACAGGACCATTCCAGTGGTGTCTCACTGTGCAGACATGAGATGCCTGCCCTATCTCTGGGCTGCCTGTGGCAGTGGTATGAGAAACATGGAAGCTATGGGTTAGAGATAAGGGCTCAGGATTATGAAAATCCAAAGAGACTAGGTGGTGTCGGTCATTTTCCATTTCGTGCCTATTTTGTTCCTTCTTTATCAGCTGTTCAGCTGTTTAAGAACCATGAAAACCAATATGTAAATAGCAGTGACAAGTTTTCTAATTGTAAGGTTTCAGAGACATGTGAAATGATTGACATTTCAGAGCACTCTTCTACTGCCAGTCAACATTCAATATTTTCTGCAATCATTCAAACACCAGAGAAGACAGATTCTATCAATAATGCATCTAATCCATCTATCAACTCAACATGCTTTGGTGATTTAGAGCTTCTTTTTGAATATTTTGAATATGAACAGCCTCAACAAAGACAGCCTCTATATGAGAAGATACAGGAGCTGGTTAGAGGCGATAAACCAATCCAGTCTAATACTTATGGGGACCCAACTAAACTGGATTCGATAAACCTGCGAGATCTTCATCCTAGATCTTGGTAA 3162 0.3906 MHCALQEIGNDSPEVSEAGKDSISTIYQKQNKLTSLEDCQESSLSRINSDSRCAILSFLNFEPDGTWRIVALPVQCLNHINLASGIDMDGLQLLFPPPVNRLKIDQCKGPRGPLPPYAYPVKSFTRRSFTGSNVRRRCQNKIANKASKLNGLPGDSCSQSSLVNSPSLFPDSSAAVNSSDKFISNSKEDKSLKKNSRKRTRKKVRQSKKQSSDSGSTEREVLAEEYICGLTSETCSSNDVDKEAGLMLYTTPEFSSSDDKSIKFDCERNGMNENINVTEAQKSSNSYIDEAAMSIVTAPIVHNSAGECGIESKNQLQDRGHDFAVIDRETKGIQHIELCCFNDVQDSLVLDSVSIGSKSDESPNASDIGKRSNKASCRITSNSGDGYFLGQNLMNGIGGNYENNEGIRHGGQNCIGNDKRVKQKRTMSKSSSFNKGVGILHGRTGKENSHSVWQKVQKNSSDECGGDLKKVNTTLSHFVSTAEKDPSVIRNCNSVGVNVASKPEDKKHFKNKVGRKSKGKVDSVSKKGHCNYSRKGSHYNRTSSNDSVKVSVQQNDTSHISSQEINQQGLSSVSGFNSDTNCLVAGFQTNGVEQETSEIVHSAQFHLEESDIQKSSCHSIANTKNENINIHDSSLVMPGEIINQPNMSEEQSSVSYNLLGDEVGQTVKEVSSADYNAQNHSSGSTLWKWIPIGKKDTGLEKSESNSSSPEYSDETSCKSFNLENSVEPKLAPVSQNQDSSLNASSTCMGQIYNGVSCLNEGENHKLGNEVACPLEEHRDKHEVANHMICECESENKVILENDSYRIAQAVNDACKSQLACDAVHMATGGPVAEFERLLHFCSPVICQSSNSLSCLTCSQDHSSGVSLCRHEMPALSLGCLWQWYEKHGSYGLEIRAQDYENPKRLGGVGHFPFRAYFVPSLSAVQLFKNHENQYVNSSDKFSNCKVSETCEMIDISEHSSTASQHSIFSAIIQTPEKTDSINNASNPSINSTCFGDLELLFEYFEYEQPQQRQPLYEKIQELVRGDKPIQSNTYGDPTKLDSINLRDLHPRSW. 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04523 1053 MobiDBLite consensus disorder prediction 355 375 - -
Seca10g04523 1053 MobiDBLite consensus disorder prediction 503 547 - -
Seca10g04523 1053 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 9 1053 - -
Seca10g04523 1053 Pfam Protein of unknown function (DUF789) 832 1053 IPR008507 -
Seca10g04523 1053 MobiDBLite consensus disorder prediction 173 218 - -
Seca10g04523 1053 MobiDBLite consensus disorder prediction 698 718 - -
Seca10g04523 1053 MobiDBLite consensus disorder prediction 503 529 - -
Seca10g04523 1053 MobiDBLite consensus disorder prediction 428 448 - -
Seca10g04523 1053 MobiDBLite consensus disorder prediction 702 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04523 Seca-Chr10 103314687 103321793 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04523 - - aprc:113867773 1439.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04523 10 103314687 103321793 Seca10g04523 10 103314687 103321793 ECH