Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04331 ATGAATAGCATGTTCAGATTTTGTTACAGTTCGGGTAATTCTAAGCCAAGGAAAGATGAGAAGATAGAAAGTGCTGGTTCGATTCCTACAGGAACACAAGAGAATATTAATAATTTGGGGTTGAAATTGAGAGACACATTCTACATATCCCATGGATCACCCACTCTCGCCATAGATGATACAATCCCTGCATGGAACTTCTTGAAATCGTGGAAACAGGTCTTTCCGTCGCGACCCTCTTCCATTCTCCTCATCTCCGGCCACTGGGACACCGATGTCCCCACCGTCAACGTCGTTGACCAAAACGACACCATCTATGACTTCTATGGCTTCCCAAAAGCCATGTACAAGCTCAAGTATCCAGCAGCAGGTGCTCCACACTTGGCAAAGAGGGTGAAGGAGCTACTCGCAGCATCAGGGTTCAGCCGTGTGAATGAAGATAGGAAACGTGGTCTTGACCATGGTGCTTGGGTGCCTCTCATGTTGATGTACCCTGAGGCAGACATACCAGTGTGTCAACTCTCTGTATCATCAAACAGAGGTGGTACTTATCACTATAACATGGGAAAGGCTTTGGCACCTCTTAAGGATGAAGGTGTTCTAATCATTGGATCTGGGAGTGCTACCCATAACCTCAGAGCAATTGGACCTCGTAATAGCCCTCCTGCTCCCTGGGCTATGGCATTTATGTCTTGGTTAAAAACCTCTCTTCTTGATGGAAGATATGAGGAAGTGAATCAGTATGAAGAGAAGGCTCCATATGCAAAAATGGCTCATCCCTGGCCGGATCATTTCTTCCCATTGCATGTGGTAATGGGGGCTGCTGGTGAAAATGCTAAGGCCAAGGTTGTGCACGATAGTTGGGATGGTGGTTCTATTTCTTATGCTTCTTTCAGCTTTACAGCAGCCACTACGAGTTGA 921 0.4636 MNSMFRFCYSSGNSKPRKDEKIESAGSIPTGTQENINNLGLKLRDTFYISHGSPTLAIDDTIPAWNFLKSWKQVFPSRPSSILLISGHWDTDVPTVNVVDQNDTIYDFYGFPKAMYKLKYPAAGAPHLAKRVKELLAASGFSRVNEDRKRGLDHGAWVPLMLMYPEADIPVCQLSVSSNRGGTYHYNMGKALAPLKDEGVLIIGSGSATHNLRAIGPRNSPPAPWAMAFMSWLKTSLLDGRYEEVNQYEEKAPYAKMAHPWPDHFFPLHVVMGAAGENAKAKVVHDSWDGGSISYASFSFTAATTS. 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04331 306 PANTHER UNCHARACTERIZED 45 303 - -
Seca10g04331 306 MobiDBLite consensus disorder prediction 9 29 - -
Seca10g04331 306 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 46 300 IPR004183 GO:0006725|GO:0008198|GO:0016491
Seca10g04331 306 CDD 45_DOPA_Dioxygenase 46 300 IPR014436 GO:0008270|GO:0016701
Seca10g04331 306 PIRSF Doxgns_DODA 41 302 IPR014436 GO:0008270|GO:0016701
Seca10g04331 306 Gene3D - 41 301 - -
Seca10g04331 306 SUPERFAMILY LigB-like 46 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04331 Seca-Chr10 97976489 97981647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04331 K15777 - gmx:100810694 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04331 10 97976489 97981647 Seca10g04331 10 97976489 97981647 ECH