Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04323 ATGGCACACAAAATCCTGTGCAAACCAAGCTTCTTTCTCACTCTCAGACTTAGCAGAATGGGTAGTTATACTTCACAGCACATTCATCATCCATTTTTCCACCCACCACCACCACCACCGTCCTCTTACTTCCTCAACACTCATCCAATCTCACTCCATTCAACAAGAACGAAAACAAGCACCACAACCGCCATCGAGGGTTCAGCAAAAGGGTGTGCGGAGTACCTGGAACTAACAGACGAGGAGTTGATGAGACAGTGCGAGATGGGCACCTTCAAGTCCTCAGGTCCAGGTGGCCAGCACCGCAACAAGCGCGAGTCCTCCGTGCGCCTCAAGCACTTACCCACTGGCATAATCGCTCAGGCTTCTGAGGACCGCTCCCAGCACAAAAATCGTGCTTCCGCGCTGAATCGCCTTCGCTCTCTTATCGCTCTCAAAGTCAGAAAAACGGTTGATCTTGATGCTTATTCTCCACCTCGAGAGCTTCTTCAGATACTTCCTCCGAAGTCAACCATTAGAGGGTCAGAGATTGGTCCACAAATTGGACCTAATAACCCAAAGTTTGTAATGGGAATGCAACCTCTTTTGGACCTCATTTTTGCAGTTGAGGGATCCATCTCAGAAGCTGCTAAATATCTTGGACTATCTACAGGGGCATTGTCTCGGTTAATCCTATCCGATGATTCACTTAGAATGGAAGTAAATGATCTGCGGGCATCAAAGGGTATGAAGCCTCTCAAGTAG 744 0.4825 MAHKILCKPSFFLTLRLSRMGSYTSQHIHHPFFHPPPPPPSSYFLNTHPISLHSTRTKTSTTTAIEGSAKGCAEYLELTDEELMRQCEMGTFKSSGPGGQHRNKRESSVRLKHLPTGIIAQASEDRSQHKNRASALNRLRSLIALKVRKTVDLDAYSPPRELLQILPPKSTIRGSEIGPQIGPNNPKFVMGMQPLLDLIFAVEGSISEAAKYLGLSTGALSRLILSDDSLRMEVNDLRASKGMKPLK. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04323 247 PANTHER LD18447P 72 241 - -
Seca10g04323 247 Coils Coil 119 139 - -
Seca10g04323 247 Pfam RF-1 domain 86 145 IPR000352 GO:0003747|GO:0006415
Seca10g04323 247 SUPERFAMILY Release factor 84 149 IPR045853 -
Seca10g04323 247 Gene3D - 43 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04323 Seca-Chr10 97829167 97833842 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04323 - - gmx:100793467 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04323 10 97829167 97833842 Seca10g04323 10 97829167 97833842 ECH