Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04300 ATGCAGAGGTGGGAAGGGGGTCCAACCAAAATTCCATGGTCTTTCAATGCTGAAGAGACTATGTATCTGCTGAAGGGAAAAGTGAAGGTTACTGTTGAAGGATCTGTTGGATCTTTTGAAATTGGAGCTGGTGATTTAGTTGTCTTTCCAAAAGGAATGAACATTACTTGGGAAGTAATTGAAGCTGTGAAGAAGCACTACAACTTGAAAAAGTAA 216 0.3981 MQRWEGGPTKIPWSFNAEETMYLLKGKVKVTVEGSVGSFEIGAGDLVVFPKGMNITWEVIEAVKKHYNLKK. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04300 71 SUPERFAMILY RmlC-like cupins 3 67 IPR011051 -
Seca10g04300 71 Gene3D Jelly Rolls 1 69 IPR014710 -
Seca10g04300 71 Pfam EutQ-like cupin domain 4 67 IPR008579 -
Seca10g04300 71 CDD cupin_TM1112-like 4 69 - -
Seca10g04300 71 PANTHER OS04G0445200 PROTEIN 3 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04300 Seca-Chr10 97438668 97439815 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04300 K06995 - gmx:100807654 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04300 10 97438668 97439815 Seca10g04300 10 97438668 97439815 ECH