Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04289 ATGCCTTGCTGGTCAGCAGAAAATGCCACAAAGGCCTATCTCAGCACTGTTAAAATGCAGGGTCAAAAGGCTAAAGAACCAGCTGTTGCTGAGTTTATATCAGCACTAGCTGCTGGAAACAATGCACAACTAATGGTTGTGGCTTGTGCTGGTGCAGCAGACTCTACCACACTAGCTTTGGTAGCTGCTGCTAATCAAACTGGTGGACATGTAGTTTGCATTGTCCCTAGCAATGAAGAGCTAAATGCCTCCAAAATTTCCCTTGGTGTAGCTGCTAGTGAAGTTCAATTCATGGTTGGTGATGCTCAAGAATTGTTGTTAAACCAAGCTGATTTTGTGCTAATTGATTGTAACCTTGTGAACCATGAAGAGATTCTTAGAGCTGTCCAAGTTGGTGTTGGTTGTGGCAAGCAAAATGGGACAGTGGTTGTTGGTTACAATGCATTTAGCTGCAAAGGGTCTTGGAGGTCATGTGAATCAAAAACTCAGTTGCTACCTATAGGAGAAGGGTTATTGGTGACAAGATTTGGAGCAAGTGTAACTAGTCCTAAACATGGATCTGGAATGAGTAAGAGCAGAAGCCGTTGGGTTGTCAAGGTAGATAAATGCACTGGTGAAGAACATGTATACAGGATTAGAGTTCCACAAGGAAAAGTCATTCAAGCTTAA 669 0.4275 MPCWSAENATKAYLSTVKMQGQKAKEPAVAEFISALAAGNNAQLMVVACAGAADSTTLALVAAANQTGGHVVCIVPSNEELNASKISLGVAASEVQFMVGDAQELLLNQADFVLIDCNLVNHEEILRAVQVGVGCGKQNGTVVVGYNAFSCKGSWRSCESKTQLLPIGEGLLVTRFGASVTSPKHGSGMSKSRSRWVVKVDKCTGEEHVYRIRVPQGKVIQA. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04289 222 PANTHER DUF1442 FAMILY PROTEIN 3 211 IPR009902 -
Seca10g04289 222 Pfam Protein of unknown function (DUF1442) 4 211 IPR009902 -
Seca10g04289 222 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 144 IPR029063 -
Seca10g04289 222 Gene3D Vaccinia Virus protein VP39 5 175 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04289 Seca-Chr10 97227123 97228967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04289 - - gmx:100805528 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04289 10 97227123 97228967 Seca10g04289 10 97227123 97228967 ECH