Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04287 ATGGGAAACTCCTTCTGCTTGTTTTGCGGTTGCGTTGCTCAGTCGAGCGTTGGGGTGGTGGAGCAGTGGGGTCGCTTCCACCGTCTCGCCCAGCCTGGCTTCCACTTCTTCAACCCCCTCGCCGGAGAATGCCTCGCTGGCATCCTCTCCACCAGGATCTCCTCTCTCGACGTCAAAATCGAAACCAAAACCAAGGATAACGTGTTTGTGCAGTTGCTATGCTCGATTCAATACAGGGTGGTTAAGGAAAACGCTGATGATGCTTTCTACGAGTTGCAAAATCCACAGGAACAGATCCAGGCTTATGTTTTTGATGGGTTCGGTGTTGTTGTAGTGGCCCGTGCTATTGTTCCGAGAATGAATTTGGATGAGCTGTTTGAGCAGAAGGGTGAGGTTGCCAAAGCTGTGCTGGAGGAACTTGAAAAGGTGATGGGAGAATATGGATATAGCATAGAGCACATACTGATGGTTGATATTATACCTGATGCTTCTGTGCGGAGGGCAATGAATGAGATCAATGCAGCTCAAAGGATGCTACTTGCTAGTGAATTCAAAGGAGAAGCTGACAAAGTGCTTCTAGTTAAAAAAGCAGAAGCAGAAGCTGAATCAAAGTATTTGGGTGGGGTTGGTGTGGCTAGACAGCGGCAAGCTATCACAGATGGCTTGAGAGAGAACATATTGAATTTCTCCAACAAGGTAGAAGGCACTTCCGCTAAGGAGGTGATGGATCTTATCATGATTACTCAGTACTTTGACACAATCAGAGACCTTGGGAACTCATCAAAGAACACCACAGTTTTTATACCCCATGGACCTGGCCACGTCAGGGATATTGGGGAACAAATACGCAATGGACTGATGGAAGCATCCAGTGCGCAAGTAAATGATATCGAGTGA 897 0.4727 MGNSFCLFCGCVAQSSVGVVEQWGRFHRLAQPGFHFFNPLAGECLAGILSTRISSLDVKIETKTKDNVFVQLLCSIQYRVVKENADDAFYELQNPQEQIQAYVFDGFGVVVVARAIVPRMNLDELFEQKGEVAKAVLEELEKVMGEYGYSIEHILMVDIIPDASVRRAMNEINAAQRMLLASEFKGEADKVLLVKKAEAEAESKYLGGVGVARQRQAITDGLRENILNFSNKVEGTSAKEVMDLIMITQYFDTIRDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMEASSAQVNDIE. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04287 298 CDD SPFH_like_u4 11 286 - -
Seca10g04287 298 Gene3D Band 7 domain 46 175 IPR036013 -
Seca10g04287 298 SMART PHB_4 7 173 IPR001107 -
Seca10g04287 298 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 6 292 - -
Seca10g04287 298 Pfam SPFH domain / Band 7 family 14 187 IPR001107 -
Seca10g04287 298 SUPERFAMILY Band 7/SPFH domain 48 177 IPR036013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04287 Seca-Chr10 97195201 97197997 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04287 - - gmx:100788194 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04287 10 97195201 97197997 Seca10g04287 10 97195201 97197997 ECH