Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04284 ATGGCTTCCACCAACTCCACCTCCACCGACCCTCTCCCTTCTTCTTCCTCCGACGACATCGCCGTCAAAGCCGTTAACAAACGCTATGAGGGTCTCGTCACTGTCAGAACCAAAGCGATCAAAGGCAAAGGTGCTTGGTATTGGGCACACTTAGAACCCATTCTTGTTCGTAACCCTGACACTGGTGTCCCCAAATCTGTCAAACTCAAGTGCTCCCTCTGTGACTCTGTTTTCTCTGCTTCAAACCCTTCTAGAACCGCTTCTGAGCACTTAAAGCGTGGAACTTGTTCCAATTTCAGCTCCGGTTTGAAACCCGGTTCGGTTCCTTCCCCTCTTCCCATTTCATCCGTTGCCGGTTCGAACCGGAAAAGGGGTTCACCGGGTTCACCTCTGCCTTATCAAAACCATGCCTTGGCAATGGTTGAAATAGGGTACCCTCAGGTGCATGGTAATACCGTGAACCAGCAGAACCAGCACCATTTGGTGCTGTCTGGTGGGAAGGAAGATTTGTGTGCTTTGGCTATGTTTGAGGATAGTGTGAAGAAGCTAAAGAGTCCAAAGACTTCGCCTGGTCCTGCTTTGAGTAAAGATCAGGTCAATTCTGCTTTGGAATTGCTTGCTGATTGGTTCTATGAGTGTTGTGGGTCTGTGTCTTTGTCTACTATTGAGCACCGTAAGTTTCAAGCTTTTCTTGGCCAGGTGGGTTTGCCAGCAGCAACAAGTTTGAGGCGTGAGATTTCTGGTCCAAGGCTTGATGCTAGGTTCAGTGAGGCAAAAGCTGAGTCTGAAGCTAAGATAAGGGATGCAATGTTTTTTCAGGTGGCTAGTGATGGTTGGAAGAATAGGAATTGGTATAGTTTGTGTTGTGGTGGTGAGAATTTGGTTAAGTTTATGGTGAATCTTCCAAATGGGACTAGTGTGTTCCAAAAGGCAGTGTTCACTGGGGGAGTGGTGTCATCAAAGTATGCTGAGGAGGTTTTGTGGGAAACTGTGACAGGTGTTAGTGGGAGTGTGGTGCAAAGCTGTGTGGGGATTGTTGCAGACAAGTTTAAGGCTAAGGCATTGAGGAACTTGGAGATTCAGAACCATTGGATGGTAAATACTTCTTGTCAGCTTCAGGGGTTCATTAGTTTAATCAAGGATTTTAACAACGAGCTACCACTTTTCAGGGTTGTCACTGAGAATTGCATAAAGGTTGCAAATTTTGTGAACAATGAATCTCAGGTGAGGAATATTTTTGTCAAGTACCGGATGCAGGAGCTGGACTATGCTGGGTTGCTTCGAGTCCCTTCACCAAAATGTGATCCTTTGAAGAATTTTGCATCTGTGTTTCCAATGCTAGAGGACATTTTAACCTGTGCTAGAGTGATCCAAATGGTTATGTTGGAGGACACATTTAAGGTAATGTGCATGGAGGATCCACTAGCCAGAGAAGTAGCTGGGATGGTTCAGAATGAGGGGTTTTGGAATGAACTAGAAGCAGTTTATTCACTTGTGAAGCTTATCAAAGGAATGGTTCAGGACATGGAAGCTGAAAGGCCATTGCTTGGTAGGTGCTTGCCTCTTTGGGAGGAACTAAGAACCAAAGTGAAGGAGTGGTGTGCTAAGTACAATGTTGTGGAAGGACCTGTGGAGAAAATACTTGAAAAAAGGTTCAGGAAAAACTATCACCCTGCATGGTCAGCAGCATTTATACTTGATCCACTTTACTTGATTAAAGACACAAGTGGAAAGTACCTTCCTCCATTCAAGTGTTTGACACGTGAACAAGAGAAAGATGTGGATAAGTTACTGACAAGGCTAGCTTCAAGAGAAGAAGCTCATGTTGTGTTGATGGAGCTAATGAAATGGAGGTCAGAGGGGCTTGATCCACTCTATGCACAAGCTGTTCAGATGAAACAAAGGGATCCTGTGACTGGGAAGATGAAAGTTGCAAATCCATTAAGTAGTAGACTTGTGTGGGAAACATGCTTGTGTGAGCTTAAATCCCTTGGGAAGATTGCAGTTAGGCTCATTTTTCTGCATGCAACCTCATGTGGGTTTAAGAGTAATTGGTCTTTCATAAGGAAGATTTCTGCAAATAAGAACTCAAGAATTGGCTTGGAAAGAGCTCAGAAAATGATATACATTGCAGCTCATGCCAAGCTTGAAAGGAGAGACTTTTCCAGTGAGGAAGAAAAGGATGCAGAATTGCTTGCCATGACTGGTAGTGAGGATGGCATGCTGGCTGAGGTCTATGCTGATGCAACCTTAGTGTAA 2259 0.4471 MASTNSTSTDPLPSSSSDDIAVKAVNKRYEGLVTVRTKAIKGKGAWYWAHLEPILVRNPDTGVPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCSNFSSGLKPGSVPSPLPISSVAGSNRKRGSPGSPLPYQNHALAMVEIGYPQVHGNTVNQQNQHHLVLSGGKEDLCALAMFEDSVKKLKSPKTSPGPALSKDQVNSALELLADWFYECCGSVSLSTIEHRKFQAFLGQVGLPAATSLRREISGPRLDARFSEAKAESEAKIRDAMFFQVASDGWKNRNWYSLCCGGENLVKFMVNLPNGTSVFQKAVFTGGVVSSKYAEEVLWETVTGVSGSVVQSCVGIVADKFKAKALRNLEIQNHWMVNTSCQLQGFISLIKDFNNELPLFRVVTENCIKVANFVNNESQVRNIFVKYRMQELDYAGLLRVPSPKCDPLKNFASVFPMLEDILTCARVIQMVMLEDTFKVMCMEDPLAREVAGMVQNEGFWNELEAVYSLVKLIKGMVQDMEAERPLLGRCLPLWEELRTKVKEWCAKYNVVEGPVEKILEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLCELKSLGKIAVRLIFLHATSCGFKSNWSFIRKISANKNSRIGLERAQKMIYIAAHAKLERRDFSSEEEKDAELLAMTGSEDGMLAEVYADATLV. 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04284 752 SUPERFAMILY Ribonuclease H-like 357 717 IPR012337 -
Seca10g04284 752 MobiDBLite consensus disorder prediction 110 131 - -
Seca10g04284 752 PANTHER OSJNBA0013A04.12 PROTEIN 25 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04284 Seca-Chr10 97090723 97092981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04284 - - psat:127131004 1280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04284 10 97090723 97092981 Seca10g04284 10 97090723 97092981 ECH