Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04165 ATGGAGAGCCTTTGTCAAAATGAGGCCTCCAAATTATGCTCTCAATGTTGTTGCTCAGTCCCATTTTTCAACTCACCAGGATCACATAACTCAAAAGCAAAACCCAGAAACAGTTCTTCAGAGTGTCGCCATAGCTTTGCAGCTACAACAACATCCTCTATCTTCCCAAATACTCACTTCACTAACCATGAGTCTCTTCCATCTCTTCAGGAATCATTCAATGAATTCAACAAAGTGTTCCCTCAGTATTCTGAGACTGAACAAGTTGACCATGTTAGAGCCAAAGATTATTCCCATCTCTCAGTTTCCAACCACACTTGCCTTGATTATATTGGTACTGGCCTCTTCTCTTACTCTCAGTTGCAACATCATGATACATCAAAAACCCAACTTGCTTCTTCTTATTCTGATATTCCATTCTTTAGCATATCCTGCAAGACTGGGAGTCTTAAGACTTTATTGCTTCATGGTGGACAAGAGTCAGAATTTGAGTCTGCAATGAGAAAAAGAATCATGGGTTTCCTTAACATATCTGAAAATGATTACTTCATGGTTTTCACAGCAAACAGAACATCAGCTTTCAAACTTGTAGCAGATTCCTACCAATTCCAATCTAGTAGGAGGCTTTTGACAGTTTATGACCATGAGAGTGAGGCTGTGGAAGCAATGGTTAGTTGCTCAGAGAAGAGAGGAGCTACAGCTATGTCAGCAGAGTTCTCATGGCCAAGGTTCAGGATTCAGGCAGCAAAATTGAAGAAGATGATTGTGAGTAAGAGAAATAAGAAGAAAAAGAGGGGTCTTTTTGTTTTCCCACTTCATTCAAGAGTAACAGGAGCTAGATATCCTTATCTTTGGATTAGCATAGCACAGGAGAATGGGTGGCATGTATTGATTGATGCCTGTGCATTGGGACCAAAAGACATGGACTGCTTTGGCCTCTCTCTCTTTCAACCAGACTTTCTGATTTGTTCTTTCTATAAGGTCTTTGGTGAAAACCCTTCTGGATTTGGATGCCTTTTTATCAAGAAATCTGCTATTTCTAGTTTGGAAGCCTCATCTTCTGCAGGAATAGTGAACCTTGTACCAGAAAAGCAGCCACATCAACCATTAGGGGATTCTTCTGGTACTGACACAGAATTTGAACAAAAATCAATACCTATCTTACATTTACATGAAGATGAACCATTTTATTTAACATCTTTATCTGGTTCCTTACAAACCACACAACCTGGAAAAATTGAAGAAGGAGAATCATCTAAGATTCAGATCATAGAAGCACCTACAGTGTCAAAATCAAAAGTTCCTCAAAGTTCTGAAATTGAGGAGGTACAAAACCCAGTTCAGACCCTTAAAATGAAGAATGTCCAAGAAAGTGAAAATGGGAGATTTGATATTGAATGCAGATGCTTAGATCATGTGGATTCTTTAGGACTGATACTGATCACTAACAGGGCAAGGTACCTCATAAATTGGCTTGTAAACTCAATGTTGAAGCTTAAGCATCCTAACACAGAAGGGGTTCCTCTGGTCAAGATTTATGGTCCAAAAGTGAAATTTGACAGGGGACCTGCTTTGGCATTCAATATATTTGATTGGAATGGTGAAAAAGTTGAGCCAGTTCTTGTTCAGAAACTTGCTGATAGAAGCAATATTTCTATAAGCTATGCATTCTTGCATCATATCTGGTTTGCAGATAAGTATTCAGAAGAGAAAGGAAGAGTTCTACAGACCAAAGTACTTGAAGACCAAGGAGTGACAGCCAACAAGAAGAAAGATAGAGATAATGTTGGAATGACTGTGGTTACTGCTGCATTAGGCTTTTTGGCTAATTTTGAAGATGCCTATAAGCTTTGGGCTTTTGTTGCTAAATTCCTTGATGCTGACTTTGTGGAGAAAGAGAGGTGGAGATATACTGCTCTCAATCAAAAAACAGTTGAAGTTTAA 1944 0.3894 MESLCQNEASKLCSQCCCSVPFFNSPGSHNSKAKPRNSSSECRHSFAATTTSSIFPNTHFTNHESLPSLQESFNEFNKVFPQYSETEQVDHVRAKDYSHLSVSNHTCLDYIGTGLFSYSQLQHHDTSKTQLASSYSDIPFFSISCKTGSLKTLLLHGGQESEFESAMRKRIMGFLNISENDYFMVFTANRTSAFKLVADSYQFQSSRRLLTVYDHESEAVEAMVSCSEKRGATAMSAEFSWPRFRIQAAKLKKMIVSKRNKKKKRGLFVFPLHSRVTGARYPYLWISIAQENGWHVLIDACALGPKDMDCFGLSLFQPDFLICSFYKVFGENPSGFGCLFIKKSAISSLEASSSAGIVNLVPEKQPHQPLGDSSGTDTEFEQKSIPILHLHEDEPFYLTSLSGSLQTTQPGKIEEGESSKIQIIEAPTVSKSKVPQSSEIEEVQNPVQTLKMKNVQESENGRFDIECRCLDHVDSLGLILITNRARYLINWLVNSMLKLKHPNTEGVPLVKIYGPKVKFDRGPALAFNIFDWNGEKVEPVLVQKLADRSNISISYAFLHHIWFADKYSEEKGRVLQTKVLEDQGVTANKKKDRDNVGMTVVTAALGFLANFEDAYKLWAFVAKFLDADFVEKERWRYTALNQKTVEV. 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04165 647 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 70 608 - -
Seca10g04165 647 Pfam Aminotransferase class-V 166 356 IPR000192 -
Seca10g04165 647 SUPERFAMILY PLP-dependent transferases 163 356 IPR015424 -
Seca10g04165 647 Gene3D - 155 390 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04165 Seca-Chr10 93052790 93054754 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04165 - - aprc:113867925 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04165 10 93052790 93054754 Seca8g07449 8 171521969 171523933 ECH
Seca10g04165 10 93052790 93054754 Seca10g04165 10 93052790 93054754 ECH
Seca10g04165 10 93052790 93054754 Seca8g07449 8 171521969 171523933 PCT