Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04097 ATGGGAGCCCTTAAGTGGGATGATGTTGTGAATCATCATCAGGGATGGAGACTTGTCACTTGCATTTGGTTACATGCTGGAGTTATTCATTTGGCAGCAAACATGTTGAGCCTGGTCTTCATTGGCATTCGCCTTGAACAACAATTTGGGTTTGTGAGGATAGGAATCATTTACCTGTTGTCTGGATTCGGCGGGAGTGTACTGTCTTCACTATTTATTAGAAACAACATCTCTGTTGGTGCTTCTGGTGCTCTTTTTGGACTTCTTGGAGCAATGCTTTCAGAACTTATCACAAACTGGAGTATTTATACCAATAAAGCAGCAGCTTTGCTCACACTTCTGCTTATTATTGCCATCAATCTTGCCATTGGCATGTTGCCACATGTTGATAATTTTGCTCATATTGGGGGGTTCCTGACAGGATTTCTCCTTGGTTTTATTTTCCTACCCCGTCCTCAATTTGGGTGGTTAGAGCAGCAACATCTTCCTGCTGGTGTTCGCCTCAAGTCAAAATACAAGGCTTACCAATATGTTCTATGGATTGTCTCTGTTATTCTACTGATTGTCGGGTTATCAATTGCTCTGGTGATGCTATTCCGGGGTGAGAATGGGTATGATCACTGCCATTGGTGTCACTACCTAACGTGTGTTCCAACTTCAAAATGGGAATGTAATGACAATTAA 684 0.4225 MGALKWDDVVNHHQGWRLVTCIWLHAGVIHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELITNWSIYTNKAAALLTLLLIIAINLAIGMLPHVDNFAHIGGFLTGFLLGFIFLPRPQFGWLEQQHLPAGVRLKSKYKAYQYVLWIVSVILLIVGLSIALVMLFRGENGYDHCHWCHYLTCVPTSKWECNDN. 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04097 227 PANTHER RHOMBOID-RELATED 1 224 IPR002610 GO:0004252|GO:0006508|GO:0016020
Seca10g04097 227 FunFam RHOMBOID-like protein 1 151 - -
Seca10g04097 227 Pfam Rhomboid family 10 152 IPR022764 GO:0004252|GO:0016020
Seca10g04097 227 Gene3D - 1 151 IPR035952 -
Seca10g04097 227 SUPERFAMILY Rhomboid-like 6 153 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04097 Seca-Chr10 90620802 90623846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04097 - - gmx:100813345 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04097 10 90620802 90623846 Seca10g04097 10 90620802 90623846 ECH