Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04062 ATGGGGGCTGGTTTTTCTACAACCACAGCAGAAAATGATGATGGGGGATCTCTTTTTCTGCCATCAGAGACTGGTCTTGATGATATTCCAGAGAGCTGCATCTCTTCCATTCTGATGAGTTTTGATCCACAAGAGATTTGCAAATTGGCCAGAGTGAACAGAGCTTTCCACAGAGCTTCCTCTGCTGACTTTGTGTGGGAATCAAAGTTGCCCCCATCTTACAAGTTTCTTGTCAATAAAGTTTTTGGTGAAGAAAAACTTGGTTCTATGACCAAGAAAGAGATCTATGCCAAACTATGTCAACCCAATTTCTTTGATGGTGGTACCAAAGAAATTTGGCTGGACAGATGCAGTGGACAAGTTTGTTTGTTCATGTCATCAAAGTCGTTCAAGATAACAGGAATAGATGATAGAAGATATTGGAACCATATTCCAACTGAGGAATCCAGGTTCAAGAATGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTATTAGGGGAGCTAGAGTTTGAATTTCCAAAAGGGAACTATAGCATATTTTTCAGGCTTCAATTGGGCAAAACCTCAAAGAGATTGGGCCGGCGCGTGTGCAACCTTGATCAAGTGCATGGTTGGGACATCAAGCCCGTCAGATTTCAACTATCTACATCTGACGGCCAGAGATCACTCTCCCAATGTTATTTGCGTGGGCCCGGAGAATGGGCCCACTACCACGTTGGAGACTTTTCCATTGAGAAGCCCAATCGGCCTACAAACATAAAGTTTTCTTTGGCCCAAATAGATTGCACACACACCAAAGGTGGCCTCTGCATAGATGGGGCAGTGATTTGCCCAACGGAGTTAACAGACAAATTGAAATTGAAACAATTTTAG 876 0.4292 MGAGFSTTTAENDDGGSLFLPSETGLDDIPESCISSILMSFDPQEICKLARVNRAFHRASSADFVWESKLPPSYKFLVNKVFGEEKLGSMTKKEIYAKLCQPNFFDGGTKEIWLDRCSGQVCLFMSSKSFKITGIDDRRYWNHIPTEESRFKNVAYLQQMWWVEVLGELEFEFPKGNYSIFFRLQLGKTSKRLGRRVCNLDQVHGWDIKPVRFQLSTSDGQRSLSQCYLRGPGEWAHYHVGDFSIEKPNRPTNIKFSLAQIDCTHTKGGLCIDGAVICPTELTDKLKLKQF. 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04062 291 SUPERFAMILY F-box domain 22 88 IPR036047 GO:0005515
Seca10g04062 291 ProSiteProfiles F-box domain profile. 23 69 IPR001810 GO:0005515
Seca10g04062 291 Pfam Phloem protein 2 121 279 IPR025886 -
Seca10g04062 291 PANTHER F-BOX PROTEIN PP2-A15 21 284 - -
Seca10g04062 291 CDD F-box_AtSKIP3-like 26 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04062 Seca-Chr10 89275723 89280402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04062 - - gmx:100816360 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04062 10 89275723 89280402 Seca10g04062 10 89275723 89280402 ECH