Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04023 ATGTCATGCCAATGTACAGATTCTGCTGACACTGTCTTACCTTGTTCAGCACTGCTTTTTAATTTTTCTTTTTATCAGGTGCCAAGGATGAAAAAATCTGCAGTGATGATAGCTTTGGTGCCAGATGATATTGGTAAGCCAACGGTGAAACTAGAGAAAGTTGCTATCCAGGATGGAACCTGTTTATGGGAGAATCCAATTTTCGAATCAGTTAAACTCGTTAGGGACGAAAAATCAGGAAAACTCCATGAGAAAATCTACCATTTTGTTGTTTCAACTGGATCTTCAAAATCTGGCTTTCTTGGAGAAGCATCGATTGACTTGGCTGATTTTGCTGCAGAAACTGAGCCACTCACTGTTTCTCTACCCCTAAAGTTTGCCAATTCAGGCGTAATTCTACATGTGACAATTCAGAATGTGGAAGGACATACAGATCAAAGACACGATGAAGATACTGGAGATGGAAGCTTGAAACACCAACTGAGCAATTGTAGTACAGATGAAGTTTCTCATAATGTTCATGAAGATGGCAACCTGACCTTCGAAGCATCTAATGGCGTCAATCCTGTGGTAAATTCATGGCAAGATTCTTCTAAGCTATTACCACCCGTTAGACAGAATTCAATGCCATCACAAGGAACTATTGAGGCCATTACTACAATTACAAATACCCACATGTGTAGGAGGTCGAACACAGACTGGTCAACGGGTTTAGCATCAGACGGGAGTATAGGTGACTGGACAAACAGTCTGGAAGATAATCTTCCACGAGAAAGATTAATAGTGCCTTCAGATAATGCCACCGAAAACCTCAAAAGTGAAATTGCCACCCTAAAGAGGCAAGTAGAAGTATCAGAAGCAGAGTTACAATCACTTCAGAAGCTGTTAGAAAAAGAATGCAGTCGAGGACAAAGTATGGCGAGACAAATATTCACCCTCAGAGAGGAGAGAAATATGATCAGAACTAAATATGAGCAACTCATATCCCAACAGAACCTCAATAATGAGACCAAAACTTCAAAATCTTTTAAGTCTGAGATGGAAGATGCTAGGCTTCAGTTAGAAGCAACAAAGGAAGAGCTTGTTTGTGAAAAAGCGTTGACTGCCAATCTTCAATTGCAACTCCAGAAGACACAAAACTCAAACTCTGAACTACTTTTGGCTGTGAGAGAACTTGAAGCAATGCTGGAACAAAAGAAAAAGGAAATATTGGATAATACTAAAGAGCATGATGATGCCACACAATTGGATCTCTTGAAGCACAAAATCGCAGACCAGAATGGTGAAATGAACACTTATTATAAGCAGTCTGAAGAGCTAAATAAGCATATAAAAGAGCTAACCTTGGAGTATGAGCTTTTAAAGAAAGAAAACCTGGATGTCTATTTGAGATTAAAGCAAGGAGAAGCACAACAAATTATGTTACAAAGGAAATATTCAGTTTCTCTGGCAACTATAGAACAACTTCAATCACAAGTACGGATATTAGAAGAAGAGATAAAGAAGCAGGGAGATGAATTTTCAGAGTCTTTGATCTGCATCAATGAACTTGAAAATCAAGTCAGTAATTTGGAAAGAGAACTGAAATTACAGGCAGAAAAATTTGAAGAAGACCTCCATACCATGAAATGTGCAAAAATTGAGCAAGAAGAACGGGCCATCCAAGCTGAGGAGGCCTTGAGAAAGACAAGACACAATAATGCTCTCAAATTTGAGCGTTTTCAGGATGAATATAAAAGGCTTTCAGTTGAAATGACATTGAAAGTAGAAGAGAATAAAAAGATGACCATCAAAGCTTATGCTGAAGCTGATGAATTGCAGAAGCAGAACAAACTTACAGAAGAAATGCTCCAGCAATGCAATCAAGAGCTCAGGCTTATTACAAATCAGAATGAGTTGAAACTGCAAGAGCTCTCGGACCAAGTAGATACAAAAGAAAAGGTGATAGCAATGATGTCACATGAACTAGAGATTAAGTCTAAACAACTTGAAGATTTACAGAGGCACCGAGATGAAAAGGATGAGGCAGTATCAAAGCAAATTCAATTGCTTAGAATTGAAATTAAAAAGCTGATGATAGAGGAGCAAGCATTGTCTAAAGCCAAGCCAATAGAGCACATGACCAAGATGCTAATGCAAGAGAACAAAGATAAGATGACACTTGGCACCCTACTGTCAGAAGTAGAAATCTTTAAGACACAGCACAATGAATTAAAACATAACTTGCACAAAGAACAAGCAGAGAAAGAAAATATGAAGAAAAAAATATCTCAATTAGAAGGAAAGCTGAAGGAGAAGGAAGCAGAACTAAGTGTTATGGGAAACAAGCTCAAGAATAACAAAGGACAAGCAACAGCTATATTTAAGAATTTGGTTTCAAGGGACGATGAGTGTACTGCACCTTGTTCTTCTACTAAGGAACATACTAAGAAGCCAAAACCAGAAACACACCAGGGAATGGATGCTGCATCCCCCACTGTTGGCCAAACCGAAAATGGAGGAACGATATACAAGTCAGCTGAGAACAAAGTTTGTCTAGCAGCACACAGAAGTCAAGTGAAAACATGTTCAGCAAATGAGGCTATTGCCTTCAATTATGATCATGATGGTGAGTGCAACACAAATGAACTGTTGAATGAAGTGGCAGTCCTAAAGGAAAAGAACAAATATATGGAAAGTGAGTTGAAAGAAATGGAGGAAAGATATTCAGAGATTAGTCTTAAATTTGCCGAGGTAGAGGGAGAAAGACAACAGCTTGTTATGGCTCTACGTAATCTCAAGAATGGTAAGAACTAG 2796 0.3856 MSCQCTDSADTVLPCSALLFNFSFYQVPRMKKSAVMIALVPDDIGKPTVKLEKVAIQDGTCLWENPIFESVKLVRDEKSGKLHEKIYHFVVSTGSSKSGFLGEASIDLADFAAETEPLTVSLPLKFANSGVILHVTIQNVEGHTDQRHDEDTGDGSLKHQLSNCSTDEVSHNVHEDGNLTFEASNGVNPVVNSWQDSSKLLPPVRQNSMPSQGTIEAITTITNTHMCRRSNTDWSTGLASDGSIGDWTNSLEDNLPRERLIVPSDNATENLKSEIATLKRQVEVSEAELQSLQKLLEKECSRGQSMARQIFTLREERNMIRTKYEQLISQQNLNNETKTSKSFKSEMEDARLQLEATKEELVCEKALTANLQLQLQKTQNSNSELLLAVRELEAMLEQKKKEILDNTKEHDDATQLDLLKHKIADQNGEMNTYYKQSEELNKHIKELTLEYELLKKENLDVYLRLKQGEAQQIMLQRKYSVSLATIEQLQSQVRILEEEIKKQGDEFSESLICINELENQVSNLERELKLQAEKFEEDLHTMKCAKIEQEERAIQAEEALRKTRHNNALKFERFQDEYKRLSVEMTLKVEENKKMTIKAYAEADELQKQNKLTEEMLQQCNQELRLITNQNELKLQELSDQVDTKEKVIAMMSHELEIKSKQLEDLQRHRDEKDEAVSKQIQLLRIEIKKLMIEEQALSKAKPIEHMTKMLMQENKDKMTLGTLLSEVEIFKTQHNELKHNLHKEQAEKENMKKKISQLEGKLKEKEAELSVMGNKLKNNKGQATAIFKNLVSRDDECTAPCSSTKEHTKKPKPETHQGMDAASPTVGQTENGGTIYKSAENKVCLAAHRSQVKTCSANEAIAFNYDHDGECNTNELLNEVAVLKEKNKYMESELKEMEERYSEISLKFAEVEGERQQLVMALRNLKNGKN. 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04023 931 Coils Coil 430 457 - -
Seca10g04023 931 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 48 139 IPR019448 -
Seca10g04023 931 Coils Coil 603 676 - -
Seca10g04023 931 Coils Coil 479 534 - -
Seca10g04023 931 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 850 930 - -
Seca10g04023 931 ProSiteProfiles C2 NT-type domain profile. 1 141 IPR019448 -
Seca10g04023 931 Coils Coil 728 776 - -
Seca10g04023 931 Coils Coil 340 367 - -
Seca10g04023 931 Coils Coil 546 566 - -
Seca10g04023 931 MobiDBLite consensus disorder prediction 800 817 - -
Seca10g04023 931 Coils Coil 881 915 - -
Seca10g04023 931 Coils Coil 268 302 - -
Seca10g04023 931 MobiDBLite consensus disorder prediction 799 827 - -
Seca10g04023 931 Coils Coil 375 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04023 Seca-Chr10 86637028 86641886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04023 - - gmx:100800902 1174.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04023 10 86637028 86641886 Seca10g04023 10 86637028 86641886 ECH