Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04022 ATGCGAACTCGCTTTCTCAACAACGACTACTTCACTCACCCTCCATCCCAACACCACGAAACCCTCCCCTTCCTCCACCTCCCTGTCCCTCGCCTCCCTTCGCCGCCTTCCTCCGCCGTCCACCACCACCTCCATTTCCCTTCCCCTCTCTGCGTCTCCCTCCACATCGATCCCTTGCCGATCGACGCCGCCCTCTCCGACTTCCTCTCCGCCGTTCTCCCTCACAGAATCCACGTCGAATCTCGCGACCTCACCGTTCCGAATCGAGATCGCTCCTCGTTCTTCCCTGCCGACAATCGGAATGGCGAGCAAGAAGCAGCGGTTATCTTCGAAGACCATGTCTCCGAAGCTGATATTGAATTTCCGAAAGAGAGTAAAACGATTCTTCATAGTGATAAAAATGAAGTCGTTTATGAACCGATTCAGTTTGAAACACCTGAGCTTGACACACTCTTGGTGGAAAATGTTTGCTTCACTGAGAAGGAGAGGATGCAAATGCTGTCTCAAACTCCAGAGGTTGAAAATAGCCTGGAAATGCTCAAGCCTGAGCCATCAAGGCAGTATCCTTATGAGGCTCTGGAATCAGTACCTCGAGTTGAAGATGTTATTCCGGAGCACCTGAAGGAGGTGAATGCAGATTCTTTAGAAGATAATATTTCTGTTCAGCACCTGCCACCCTCTGACCAAAACATATTTCTTATTTTGGAAGTGGATGAGGAAAGTTTAGGAATACCCCCATGCTTATCTATGATAGAAACTGTTGACTCATATTTTGGAAATATCAGACCTCAAAATTTTGATGAACGATATCAATCTGTAACAGAGGGCAAAGATCTTTTGGGTTCTGTGGAGTATAACACGATGAAGTTTTTCTCAGATGACTGTGTATCAAAGAAGAGCTTGGTGTTATCAGATCTGTCTCCTGAAAGGGATTTTATGAATATGTTAGAAACTGAACATGTTGATGGGAATATTGCCCTGCAAGGGACATCGCAGGCGAATAGTGCTTTGTTATTGAATCTAGTTACCTTCCAGGAATTTGTGTTCCTTGATGAGGACCTAATTCAAATCTTTGAAGCTTTCTATGACACAAAACAATTGGATGATCTAGAAACAAGTGATGGGGTGTTTAAGAAAGAGTTTAACTGCAAGAGTTTTGATGAATTGATTGTTAGTAATGAGATGGCACTCATAGATGACACGTTCAAATCCCTGCCTGTCCCTGTTATCTCTGATTACAAAAAGATGATAACTCTACATGATATCGTAGGAGAACTATTTTCCAACATGAAGACCCGACCCCTCTCTGCATCTGATGGAATTTACTTAAATTGGGATCTACTGGAAGAAGATAAATGCAATTACAAAATGTCTAGCTGGTGTCAGAACATATGGGCCAAGATAGATCTGAACAACCAAGCTTTCAGGGGAGAATCTTTTGATGATAGAAAATTGGTATTTGATCTAGTTTTCTATGGTGATACCATAGGTGAATATAACATTGAACAAAGTGAAGAGTTGCAGAAGTTGCTTTCTGATCACATTTCTCTGCTTGACAATGAGGCTGTAGAATTTGCTTCGAGCAAGCTATTAGAACATGGATCTTCTAAACAAGGATGTAAAGAAGAATTACCTGAAAGAAATGCAGAGAGGGCTTCTTTATTATTTAAGTCTATGTCAGAAATCAGCGATTTTGATTATTTCCTTAACCCTCAAAAAGCAACCGTTAAAGGGAATTGTAATTTTTCAGTAGAGTCCACCAATGCTAATGTTAATATTCCAAAAGTTACATCCACAGACTTGAAGGCTGGTCTACACTCACAAGGATGGCAAACTGTTTTGCATAGAGTTAAGTTGTCAGACAATATTGTGGCCATTACTGGATATTTTGAAAAATGCTATCTAGCCATTTTGCAGAGTGCTACAGAGCTGACAAAGATGCATAACTCAGATGTAGATTATTTTAAATTGCTGAGTCTTCAAAAGCACAAGCTGATTGAATACCATGTAAATGGAAACAATATGGCGTTTATTGTGTTAAGTGCAATTAAACAGGCTGCTTGGTACTTATGTTTCTATGGTCTCCATCCAGCAAGTTTGTATCTAGACAAATTATGTCAAAACTTGGACTACTTGAAATCAAGGTTAGGCTTCCTCCAATCTTTGATCAAAGATGAAAACAGGAAGGTGGACAACAATATTACAACAGTACACCCGTCACTAACAATTATTAAGGACATTTTACAGTCAAACATCAAACGGGATAGTTTGAAAGTTTTAATTGTGGCTGAAGAGGTATTCTGGTGGTCATTGAAAAATCTCCTTCTTCACATGGGATTATCATTCAATGAACTAGATAATTCTTATACAATTCGGTCGGATGCAAATAATCTGCCTGGGGACACAGATATTAAAATGAAGGAACTTCTGATTTCAGACTGCTTGCTGGTTTCATACAGGCATGTTTCTCCGTTGCTTCCATTCAACAAATTTGGCATTATCTTGGAATATGGTGGGTCATATGGCTCATCTAGAATATCTGAACTTTCACCAAACTCGGCTGGATTACCTCATCTTCACTTTTTGATGGTTGAATTGGATGACCATGCTGCCCTCAAAGCACTCTGTGAAGGTGTTGAAATACCCCCAAACACTGAAATTTTACCGGAAAGTGAGACTCCTCTTATTTTCAACCACAAGGAAAGTATGATGAATCAGAAGTTAGAGAGACTACTGAACTTTTGTCCTGTGGAACAAAGCCACGATATAAAATCTTCAAAAGTTGCAGATGAAGCAGACAATTCCGTGCAACTAATTCCTGCCGTGAAACCTGAGCATGCTCATCAGAGCTTGGAGCCACTTTTTGGATCAGTTATCATCGTGAATACTCAAAATGTAGATAAGGAAATGATAGTCTCTAGAAGAAGCTCTTACCAAGAAATTCTTGTGTTGGAGAAAGGAGGAATTCAAGTTGTTGAACGTGATTTAGATTTGCCCGTGGATATTATAATAAGTTCTGCAATTTGCTTGGCATGGTATGATAGTAGAAACCTAGGGAAGAAAGCAACTCCAGCGACTGAGGCATCTTCAAGCTTGCCTTTATGTATTGAGAATATTGCAACAGATGTTCTGACATTGCTTCGTTTTTACTTCCGTGGCTGCTTTCTGGTCTTTGAGGGAGAATTTAACTTTCTTTCAACTGTAATGGAGTCCTCGGATGGACTTTATGCGGCAGCAGCAAGCCTGGGAATTGATCTGCAGATATTTTTCTCTTACTCACCTGAGTTGACAAATGAAGTTCTGGTAAGCTGCATTAAGAGCGCTACAAAATTGACATGGGGTCTGTATCCTAAAATGCCTGACTCGGAAACTTTAGCAGAGTCATTTCTCACGCAATTTCCTGGAATAAATTCTTTAACGGCACACTCTATATTATCTTCAGGGGTCATGCTTAATGAGTTTCTTGAGTGGTCACATGAACAAAGGATTCATGTTTTAGAAAAGTATCAGGTTCCAGAAGAAAGTCTTTCTTTATTCAGTGTTTTCTGCAGATATGGGGAACGGGAGGATTCAAAATCCATAATGACAGACTGCTCCTCTTCGGTATCTTCTGGTCCAGACTCAGATAGGTGTCATTTATATCAAGTTGACAATAAAAGAAAGAGGACAACCCCTATAATTAGTCATCAGAAAGATGAACAGTGTCTTGATGAATTGTTGCAATTCGAGACATTAAACCAAGTAATTGAGGCTGTCCCGGGTTCCTCTACCATGCCAAAACCTTTTGATCTTGGTATGTCAAGAGATGCTGCGAGATCCGGAGACTTGGGAAAGCCTAGTCCGTGCATGAGTGATTTTTTTGGTCCGAGGCAAAGAAGCATTGTGACTACAACGGGAAACCCTTCCCGAGTCTCCCGGTTATCACGGAGCTGTAAAGCTCCCCAAATATCAGAGCAGCTGGAACAGCCCAGTCTATCTTTGAAAAATAAAGAGTTCGCTCAAAATGAAATACTGGACACTGCTTTCATGGGCAACAATTTGAATTGGCACAGCCTAAGTAATTCTGAGAAGCTGCATGAGGACATTAGAGGTGAGGTGGTAGACTTGACTGATAGTCCCCTATTAGATGAAAGCTTCCCCATTTCTGACTCCATGTACTTCCCAAGTTTGATGACTGAGACAGAGAAAGATCAGATAAGAAAGAATAAAATGGCAAGGAGATTGTCATTTGATAATAGTAGTCGCCCAGCAACCAACTCCTCGAAAATATGGAAATCTTTAAAAGATAAAGGGGATGTTGACGCCTATCCCGAACCAGATTTTGGGAAAGATGTATTTCCTCTTGATTTCAAGACCAGTGAAAACATAGGTTTAACTCAGGCAGCCATGAGAAACTCACGAGGATTACCCTTCCAGGAGGAAATATCATATTTGAGCGAAACCCCACTCTCACGTGCTCGCCAGTCAGCTAGTCCATTAAAGCATTCACCTTGGACAATTGAATTTATTAATAAAGTAAAAGAAAAGAGCAAATTGCGTCAAAAATCATTATCATGGAAGAATTCTAGCCCTTGTTTTGGGAACCCGGGGAGTATGTCGAAAGTTTCTAAGAGAAGAAGTCCTTCTATAATTGAGTTCTTTAAGTACCAACCTAGTAGAACACCTGGAAATATTCCGGAGCAGAAAAGACAGAAGCAATCTGGACAATCTTCAAACTCAGTCAAGAAAGGAAGATATTCCGCTCCCCTATCCTCATGGACTCCTAATGACAAGAGATCAACGAAGACACTGACTTTTGGGAAGAACGAAAGTGGAAGCCAAACTAAGCTGGTCTGGAGTGATAAAAAAAAGTTTTAG 4857 0.4072 MRTRFLNNDYFTHPPSQHHETLPFLHLPVPRLPSPPSSAVHHHLHFPSPLCVSLHIDPLPIDAALSDFLSAVLPHRIHVESRDLTVPNRDRSSFFPADNRNGEQEAAVIFEDHVSEADIEFPKESKTILHSDKNEVVYEPIQFETPELDTLLVENVCFTEKERMQMLSQTPEVENSLEMLKPEPSRQYPYEALESVPRVEDVIPEHLKEVNADSLEDNISVQHLPPSDQNIFLILEVDEESLGIPPCLSMIETVDSYFGNIRPQNFDERYQSVTEGKDLLGSVEYNTMKFFSDDCVSKKSLVLSDLSPERDFMNMLETEHVDGNIALQGTSQANSALLLNLVTFQEFVFLDEDLIQIFEAFYDTKQLDDLETSDGVFKKEFNCKSFDELIVSNEMALIDDTFKSLPVPVISDYKKMITLHDIVGELFSNMKTRPLSASDGIYLNWDLLEEDKCNYKMSSWCQNIWAKIDLNNQAFRGESFDDRKLVFDLVFYGDTIGEYNIEQSEELQKLLSDHISLLDNEAVEFASSKLLEHGSSKQGCKEELPERNAERASLLFKSMSEISDFDYFLNPQKATVKGNCNFSVESTNANVNIPKVTSTDLKAGLHSQGWQTVLHRVKLSDNIVAITGYFEKCYLAILQSATELTKMHNSDVDYFKLLSLQKHKLIEYHVNGNNMAFIVLSAIKQAAWYLCFYGLHPASLYLDKLCQNLDYLKSRLGFLQSLIKDENRKVDNNITTVHPSLTIIKDILQSNIKRDSLKVLIVAEEVFWWSLKNLLLHMGLSFNELDNSYTIRSDANNLPGDTDIKMKELLISDCLLVSYRHVSPLLPFNKFGIILEYGGSYGSSRISELSPNSAGLPHLHFLMVELDDHAALKALCEGVEIPPNTEILPESETPLIFNHKESMMNQKLERLLNFCPVEQSHDIKSSKVADEADNSVQLIPAVKPEHAHQSLEPLFGSVIIVNTQNVDKEMIVSRRSSYQEILVLEKGGIQVVERDLDLPVDIIISSAICLAWYDSRNLGKKATPATEASSSLPLCIENIATDVLTLLRFYFRGCFLVFEGEFNFLSTVMESSDGLYAAAASLGIDLQIFFSYSPELTNEVLVSCIKSATKLTWGLYPKMPDSETLAESFLTQFPGINSLTAHSILSSGVMLNEFLEWSHEQRIHVLEKYQVPEESLSLFSVFCRYGEREDSKSIMTDCSSSVSSGPDSDRCHLYQVDNKRKRTTPIISHQKDEQCLDELLQFETLNQVIEAVPGSSTMPKPFDLGMSRDAARSGDLGKPSPCMSDFFGPRQRSIVTTTGNPSRVSRLSRSCKAPQISEQLEQPSLSLKNKEFAQNEILDTAFMGNNLNWHSLSNSEKLHEDIRGEVVDLTDSPLLDESFPISDSMYFPSLMTETEKDQIRKNKMARRLSFDNSSRPATNSSKIWKSLKDKGDVDAYPEPDFGKDVFPLDFKTSENIGLTQAAMRNSRGLPFQEEISYLSETPLSRARQSASPLKHSPWTIEFINKVKEKSKLRQKSLSWKNSSPCFGNPGSMSKVSKRRSPSIIEFFKYQPSRTPGNIPEQKRQKQSGQSSNSVKKGRYSAPLSSWTPNDKRSTKTLTFGKNESGSQTKLVWSDKKKF. 1619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04022 1618 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 1 1616 IPR038824 GO:0007131
Seca10g04022 1618 MobiDBLite consensus disorder prediction 1514 1618 - -
Seca10g04022 1618 MobiDBLite consensus disorder prediction 1554 1609 - -
Seca10g04022 1618 MobiDBLite consensus disorder prediction 1516 1538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04022 Seca-Chr10 86627657 86636877 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04022 - - gmx:102663374 2290
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04022 10 86627657 86636877 Seca10g04022 10 86627657 86636877 ECH