Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04018 ATGGCTCAGAAGGTTGTGTTAAAGGTATTAACTATGACTGATGACAAAACAAAGCAGAAAGCTATAGAAGCAGCTGCAGATATCTATGGGGTTGATTCAATTGTTGCAGATGTGAAGGAACAGAAATTGACAGTGATTGGTCAAATGGACACAGTGAAAATAGTGAAGAAGCTGAAGAAAGTTGGGAAGGTGGATATAATATCAGTTGGACCTGCTAAGGAAGAGAAGAAAGAAGAAAAGAAAGAAGAGAAAAAGGAAGAGAAGAAGGAAGAGAAGAAAGAGGAAAAGAAGGAAGAGAAAAAGGAAGAGAAGAAGGAAAAGGAGGAGAAAAAGTAA 336 0.375 MAQKVVLKVLTMTDDKTKQKAIEAAADIYGVDSIVADVKEQKLTVIGQMDTVKIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEKEEKK. 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04018 111 Coils Coil 72 111 - -
Seca10g04018 111 MobiDBLite consensus disorder prediction 72 111 - -
Seca10g04018 111 ProSiteProfiles Heavy-metal-associated domain profile. 3 66 IPR006121 GO:0046872
Seca10g04018 111 SUPERFAMILY HMA, heavy metal-associated domain 2 63 IPR036163 GO:0046872
Seca10g04018 111 Gene3D - 1 75 - -
Seca10g04018 111 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04018 Seca-Chr10 86544930 86545758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04018 - - vra:106767319 125.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04018 10 86544930 86545758 Seca10g04018 10 86544930 86545758 ECH