Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04014 ATGTCTAATATGGTAGAGGTGAGAGTTCCAAATCTTGATTGTGAGGGATGTGCTTCAAAATTAAAGAAAGCTCTCTTCAAGCTCAAAGGAGTAGATGAGGTAGAGGTGGAAATGGAGGCACAAAAGATAACAGTAAGAGGGTATGGCTTGGAGGAGAAAAAAGTCTTAAAAGCAATCAAACGTACAGGCAAGGCAGCAGAGCCATGGCCATTTCCAGGGCATGCTCATTTTGCTTCATTTTACAAGTACCCCAGTTACATTGTTAACCATTACTATGATGCATATAAAAGTGAAGCAACAAGTGGAGTCCACACTTTCTTCCACACCCCTGCTGTCTATTCAGTTGCTGTGGCATCTGATGAGGCTTTTGCTTCACTCTTTAGTGATGATAACCCCCATGCTTGCACTATAATGTAA 417 0.4173 MSNMVEVRVPNLDCEGCASKLKKALFKLKGVDEVEVEMEAQKITVRGYGLEEKKVLKAIKRTGKAAEPWPFPGHAHFASFYKYPSYIVNHYYDAYKSEATSGVHTFFHTPAVYSVAVASDEAFASLFSDDNPHACTIM. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04014 138 CDD HMA 6 67 IPR006121 GO:0046872
Seca10g04014 138 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 4 135 IPR045181 GO:0046872
Seca10g04014 138 SUPERFAMILY HMA, heavy metal-associated domain 4 70 IPR036163 GO:0046872
Seca10g04014 138 Gene3D - 2 67 - -
Seca10g04014 138 ProSiteProfiles Heavy-metal-associated domain profile. 3 67 IPR006121 GO:0046872
Seca10g04014 138 Pfam Heavy-metal-associated domain 7 64 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04014 Seca-Chr10 86500529 86502576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04014 - - gmx:100802676 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04014 10 86500529 86502576 Seca10g04014 10 86500529 86502576 ECH