Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g04012 ATGAAATCGATGCCGAGATCCACCGTGGTTTTGGTTTTTCCGGTAGTCCTCATCGTCGGCGCGTTGGTGTACACGCGCTTCCTCGACACACATGAGGTCTTTCCCGCAGGTTCTTCTACCAAAGCAATACTTACGACCAAAACATATGAAATACCAAACAAACCCCGGAAGCAAATAGAGATTCCATTGAACTGCAGTGCATTCAACCTCACCGGAACATGCCCCACTAACAACAATCATTGGGATGATGATCAGGACCGTTCATCTAGTGCCACATGTCCAGATTATTTCCGTTGGATCCACGAGGATTTGAGGCCCTGGGCCCACACAGGCATCACAAAAGAGATGGTGGATAGGGCAAAAGCAACAGCAAATTTCAAGTTGGTGATATTGAAGGGTAAAGCTTATTTGGAGACTTATGAGAAGGGTTTTCAGACAAGGGATGTTTTTACCCTGTGGGGTATTCTACAGTTGTTAAGGAGGTACCCTGGAATGGTGCCTGATTTGGAGCTCATGTTTGATTGTGTTGATTGGCCAGTGGTTTTAGCTGATCATTACAATGTTATTGGGCCTAATTCTACTGACCCACCACCACTCTTTCGTTATTGTGGGAATGATGCTACTTTGGATATTGTCTTCCCTGATTGGTCCTTTTGGGGATGGCCTGAGGTTAATATAAAGCCATGGGAGATTTTATTGGGAGAGTTGAAAGAGAGCAACAAGAAGACAACATGGATGAACAGAGAACCTTATGCTTATTGGAAAGGTAATCCTGCTGTTGCTGAAACCAGACAAGACCTTATGAAATGCAATGTCTCTGACAAACAAGATTGGAATGCTCGTTTATATGCTCAGGACTGGGGACGGGAATCACAAGAAGGGTACAAGAAATCAGACTTGGCAAGCCAATGCACTCATAGATATAAGGTGTACATTGAAGGTTCTGCTTGGTCAGTCAGTGAAAAATACATTCTGGCTTGTGATTCTCTCACTTTACTTGTAAATCCTCATTACTATGATTTTTTCACAAGGGGGTTAATTCCAATTTACCACTATTGGCCTATTAAGGAAGATGACAAGTGCAGGTCCATTAAGTTTGCAGTGGATTGGGGAAATAGTCACAAGGAAAAGGTAATCTTAAAGTTTTGCAGTTTTGCTTATTACCAGGGCTAA 1173 0.4297 MKSMPRSTVVLVFPVVLIVGALVYTRFLDTHEVFPAGSSTKAILTTKTYEIPNKPRKQIEIPLNCSAFNLTGTCPTNNNHWDDDQDRSSSATCPDYFRWIHEDLRPWAHTGITKEMVDRAKATANFKLVILKGKAYLETYEKGFQTRDVFTLWGILQLLRRYPGMVPDLELMFDCVDWPVVLADHYNVIGPNSTDPPPLFRYCGNDATLDIVFPDWSFWGWPEVNIKPWEILLGELKESNKKTTWMNREPYAYWKGNPAVAETRQDLMKCNVSDKQDWNARLYAQDWGRESQEGYKKSDLASQCTHRYKVYIEGSAWSVSEKYILACDSLTLLVNPHYYDFFTRGLIPIYHYWPIKEDDKCRSIKFAVDWGNSHKEKVILKFCSFAYYQG. 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g04012 390 PANTHER KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED 65 377 - -
Seca10g04012 390 SMART cap10 165 383 IPR006598 -
Seca10g04012 390 Pfam Glycosyl transferase family 90 89 377 IPR006598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g04012 Seca-Chr10 86426737 86436576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g04012 - - gmx:100789969 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g04012 10 86426737 86436576 Seca10g04012 10 86426737 86436576 ECH