Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03980 ATGGCCATTAGCTTGAGAAGCTTGGTAATAGTTGCCCTTGCATTTTTTGTTGCCGTGCAAGGAACTCTTGGAGGTATAGAATGTGAGCATTTGAGCCACGAGACATGCGCATTTGCGGTGTCATCTGGTGGAAAAAGGTGTGTGCTTGAGAAGCATGTCAAGAGAACAGGGCAAGAAGCATACACATGCAAGACATCAGAGATTGAAGCTGATAAATTAAAGGACCATATTGAAACTGACCAATGCATCAAGGCTTGTGGATTGGACAGAAAATCCTTTGGAATCTCATCTGACTCTCTTCTTGAATCTCGCTTCACACAAAACCTCTGCTCCCCTCAGTGCTACCAAACATGCCCCAACATTGTTGACCTCTACTTCAACCTTGCTGCTGGTGAAGGTGTGTTTCTTCCCAAGCTGTGTGAAGCACAAGGTGCAAATGCTCGTCGAGGAATGGCAGAGATAAAAAGCTCTGGAATTGTGGCGCCAGGACCAGTGCACTCTCTGCAGTTCACAGCTACTCCTCCACAATCTTTTGATGCTGTGGAACTTACAGCTGAGCCTGCACTTGCACCAGCATATGCACCATACTAA 591 0.4636 MAISLRSLVIVALAFFVAVQGTLGGIECEHLSHETCAFAVSSGGKRCVLEKHVKRTGQEAYTCKTSEIEADKLKDHIETDQCIKACGLDRKSFGISSDSLLESRFTQNLCSPQCYQTCPNIVDLYFNLAAGEGVFLPKLCEAQGANARRGMAEIKSSGIVAPGPVHSLQFTATPPQSFDAVELTAEPALAPAYAPY. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03980 196 PANTHER PAR1 PROTEIN 1 191 IPR009489 -
Seca10g03980 196 Pfam PAR1 protein 26 191 IPR009489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03980 Seca-Chr10 85813490 85815687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03980 - - gmx:100784217 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03980 10 85813490 85815687 Seca10g03980 10 85813490 85815687 ECH
Seca10g03980 10 85813490 85815687 Seca10g03982 10 85892956 85895379 PCT