Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03961 ATGCCTTGCTCTTCCCTCAGTTCTAGCAGTGGTTGCGATAACAAAAACATAAACAACGAGAAGAAGAAAAACGATGGTTCTTCTCTTCGCGATTTCAAGCTGAACGAGTCCACGTTCTTAGCTTCACTCATGCCGAAGAAAGAGATTGGCGTAGATCGATTCCTCGATGCTCACCCTGACTACGATGGCCGCGGTGCCCTTATCGCTATCTTCGATTCTGGTGTAGACCCAGCTGCTGATGGATTGCAGATTACCTCGGATGGGAAACCAAAAATTCTTGACGTCATTGATTGCACTGGGAGTGGAGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGATGGTTGTATTTGTGGCGCATCAGGGGTATCTTTGGTTATCAATACTTCATGGAAAAATCCTTCTGGTGAATGGCATGTGGGTTATAAATTGGTTTATGAGCTGTTTACAGAAGATTTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGAGGAAATTGCAAGGGCTGTAAAACAACTTGATGATTTTGATCAGAAACACATCAAGGCAGAGGATGTGAAACTTAAAAGGGCCCGTGAAGATCTCCAAAATAGGCTTGATCTTCTGAGAAGGCAATCTGAGAGCTATGATGATAAAGGGCCTGTCATAGATGCTATCGTCTGGCATGATGGAGAGGTCTGGAGGGTTGCCCTTGACACACAGAGTCTTGAGGATGATCCAGATTGTGGGAAGCTCGCTAATTTTGTGCCTTTAACTAATTATAGGATTGAGAGGAAGTATGGTGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGTTAATGTCTATAATGATGGGAATGTCTTAAGTATTGTAACAGACTGTTCTCCTCATGCCACCCATGTTGCTGGTATAGCTGCTGCTTTCCACCCGAAGGAGCCGTTGTTGAATGGAGTTGCACCTGGCGCACAATTAATATCTTGTAAAATTGGGGATTCTCGCTTAGGATCAATGGAAACTGGAACTGGTTTGATTCGGGCACTGATAGCTGCTGTTGAGCATAAATGTGATCTTATCAACATGAGTTATGGTGAAGCAACATTACTGCCAGACTATGGACGCTTTGTTGAACTCGTTAATGAAGTGGTGAACAAGCATCGTCTGATATTTGTGAGCAGTGCTGGTAATAGTGGACCAGGATTGAGCACTGTTGGCGCACCTGGTGGTACATCTTCAAGTATAATAGGTGTTGGTGCATATGTTTCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCATCTGAGGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACAGCTGATGGAGACCTTGGTGTCTGTGTAAGCGCTCCCGGTGGTGCTGTTGCTCCTGTTCCTACATGGACTCTTCAACGGCGTATGCTCATGAATGGGACGTCAATGGCATCACCATCAGCCTGTGGAGGAACTGCATTGCTCATAAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATATAGTGTGAGGAAGGCTCTTGAGAATACCTCAATTCCCATAGGTCATTTACCTGAGGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCCTTTGAATATATACAGAAGTGTCAAAACATTCCATGTGTTTGGTATCAAATAAAGATCAATCAATCTGGAAAAACAAGTCCTTCTTCACGGGGCATCTACCTTAGGGAGCCTAGTGCTTGCCGGCAATCTACTGAGTGGACAGTGCAAGTTGATCCAAAATTTCATGAAGATGCCAGCAACTTTGAGGAATTGATTCCATTTGAGGAGTGTATTGAGTTACATTCTACTGAAGAGACTGTTGTGAAGGCCCCTGACTATCTATTGCTCACTCACAATGGTCGCACCTTCAATATAGTTGTGGATCCTTCCAATCTATGTGATGGACTTCATTATTATGAGGTCTATGGTATTGACTGCAAAGCTCCATGGCGCGGTCCTCTTTTCAGAATTCCAATTACCATAACAAAGGCCAAGGGTTTAACTAACCAGCCTCCTCAAATTTCATTTTCAAATATGTTATTCCATCCAGGCCATATAGAAAGGAGATACATAGAAGTACCACATGGTGCATCTTGGGCTGAAGCAACAATGAAAACATCGGGGTTTGACACAGCTCGAAGATTTTTTGTCGATGCTGTTCAGATATGCCCATTGCAAAGGCCTCTGAAATGGGAGAATGTGGTGACTTTTCCTTCTCCTGCTGCTAAAAGCTTTGCCTTTAGAGTAGTAAGTGGTCAGACATTGGAACTAGTCATTGCTCAATTTTGGTCAAGTGGCATAGGGAGTCATGAGACTGCCAGCGTGGATTTTGAGGTTGTGTTTCATGGGATAAAAGTCAATCAAGAAGAAGTTATACTTGATGGTAGTGAAGCACCAGTCAGAATTGATGCTGAAACACTACTGGTATCTGAGGAACTTGCACCTGTGGCTATTCTAAACAAGATTAGGGTCCCATATAGACCAATAGATTCTAAGATTATTGCACTTTCAACAGATCGTGACAAACTTCCCTCTGGAAAGCAGATACTGGCACTGACTTTGACCTACAAGGTTAAATTGGAAGATGGAGCTCAAGTAAAACCTCACATACCATTGCTAAATGATAGGATATATGACACAAAATTTGAGTCTCAATTTTATATGATTTCTGACTCAAATAAGCGCATATATTCATGTGGAGATGTCTATCCAAGCTCTTCAAATCTTCCCAAAGGAGAATATAATTTACAGCTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGTTATTCATTGAGCGGAATTTGGAAGAGAAGGTAGTTCATTATATCATTTTTATGTTTTTCATAATTGGTCAATTGCTGCTGAAGTCTATAAGTGCTTTTCTACTATGCTTCATGGTTTTTGAATTAATATTATATAAGTTCATGATTCTTGATAAAGTTGGGTTGCCGACTAACCATAAGTCACATCAAGAATTCTCCACAAGGATCTGTATTGGTAGGGGCAATTTCATATGGGAAACTATCATTTGCTGA 3111 0.4198 MPCSSLSSSSGCDNKNINNEKKKNDGSSLRDFKLNESTFLASLMPKKEIGVDRFLDAHPDYDGRGALIAIFDSGVDPAADGLQITSDGKPKILDVIDCTGSGDIDTSKVVKADADGCICGASGVSLVINTSWKNPSGEWHVGYKLVYELFTEDLTSRLKKERKKKWDEKNQEEIARAVKQLDDFDQKHIKAEDVKLKRAREDLQNRLDLLRRQSESYDDKGPVIDAIVWHDGEVWRVALDTQSLEDDPDCGKLANFVPLTNYRIERKYGVFSKLDACTFVVNVYNDGNVLSIVTDCSPHATHVAGIAAAFHPKEPLLNGVAPGAQLISCKIGDSRLGSMETGTGLIRALIAAVEHKCDLINMSYGEATLLPDYGRFVELVNEVVNKHRLIFVSSAGNSGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMASPSACGGTALLISAMKAEGIPVSPYSVRKALENTSIPIGHLPEDKLSTGQGLMQVDKAFEYIQKCQNIPCVWYQIKINQSGKTSPSSRGIYLREPSACRQSTEWTVQVDPKFHEDASNFEELIPFEECIELHSTEETVVKAPDYLLLTHNGRTFNIVVDPSNLCDGLHYYEVYGIDCKAPWRGPLFRIPITITKAKGLTNQPPQISFSNMLFHPGHIERRYIEVPHGASWAEATMKTSGFDTARRFFVDAVQICPLQRPLKWENVVTFPSPAAKSFAFRVVSGQTLELVIAQFWSSGIGSHETASVDFEVVFHGIKVNQEEVILDGSEAPVRIDAETLLVSEELAPVAILNKIRVPYRPIDSKIIALSTDRDKLPSGKQILALTLTYKVKLEDGAQVKPHIPLLNDRIYDTKFESQFYMISDSNKRIYSCGDVYPSSSNLPKGEYNLQLYLRHDNVQILEKMRHLVLFIERNLEEKVVHYIIFMFFIIGQLLLKSISAFLLCFMVFELILYKFMILDKVGLPTNHKSHQEFSTRICIGRGNFIWETIIC. 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03961 1036 Coils Coil 193 220 - -
Seca10g03961 1036 Gene3D - 559 692 IPR046940 -
Seca10g03961 1036 MobiDBLite consensus disorder prediction 1 15 - -
Seca10g03961 1036 FunFam tripeptidyl-peptidase 2 isoform X1 46 131 - -
Seca10g03961 1036 PRINTS Subtilisin serine protease family (S8) signature 295 308 IPR015500 -
Seca10g03961 1036 PRINTS Subtilisin serine protease family (S8) signature 482 498 IPR015500 -
Seca10g03961 1036 PRINTS Subtilisin serine protease family (S8) signature 63 82 IPR015500 -
Seca10g03961 1036 ProSitePatterns Serine proteases, subtilase family, serine active site. 483 493 IPR023828 -
Seca10g03961 1036 MobiDBLite consensus disorder prediction 1 29 - -
Seca10g03961 1036 Gene3D - 161 219 - -
Seca10g03961 1036 Gene3D Peptidase S8/S53 domain 46 138 IPR036852 GO:0004252|GO:0006508
Seca10g03961 1036 Gene3D Peptidase S8/S53 domain 223 556 IPR036852 GO:0004252|GO:0006508
Seca10g03961 1036 Pfam Tripeptidyl peptidase II 826 964 IPR022229 -
Seca10g03961 1036 FunFam Tripeptidyl-peptidase 2 559 690 - -
Seca10g03961 1036 PANTHER PEPTIDASE S8 41 946 - -
Seca10g03961 1036 FunFam Tripeptidyl-peptidase 2 homolog 223 556 - -
Seca10g03961 1036 ProSiteProfiles Serine proteases, subtilase domain profile. 48 546 - -
Seca10g03961 1036 Pfam Subtilase family 63 522 IPR000209 GO:0006508|GO:0008236
Seca10g03961 1036 SUPERFAMILY Subtilisin-like 43 559 IPR036852 GO:0004252|GO:0006508
Seca10g03961 1036 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 43 525 IPR034051 GO:0006508|GO:0008240
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03961 Seca-Chr10 84548018 84563106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03961 K01280 - gmx:100777892 1785.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03961 10 84548018 84563106 Seca10g03961 10 84548018 84563106 ECH
Seca10g03961 10 84548018 84563106 Seca10g03962 10 84569971 84577719 PCT