Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03928 ATGGGGAGCTTCAACAACACCGTCGAGATTGTCAACGAGACTGTCAACGCCGCCGCCGCCGCCATCATCACCGCCGAATCCAGAGTCCAACCTACTACCGTGCCGAAAAAACGCTGGGGAAGCTGCTGGAGTTTGTATTCGTGCTTTGGATCTCAAAAAAGCAGCAAGCGAATTGGACATGCTGTCCTTGTTCCTGAACCTGTTGCACCAACAGGTCCAACTGCTGTTGCCGCACCAAATCCTTCAACTGCTATTGTAATGCCTTCCATTGCTCCTCCCTCTTCTCCTGCATCTTTTCTCCAATCTGATCCTTCGTCTGCTATTCAATCACCAGCTGGATTACTTTCCCTCACATCCCTCTCTGTCAATGCTTTCTCTTCTGGTGGACCTGCATCCATTTTTGCCATAGGTCCATATGCCTATGAGACCCAATTAGTTTCACCACCTGTATTTTCCAACTTCACGACTGAACCATCAACTGCATCTTTTACTCCCCCACCTGAATCTGTGCAGCTGACAACACCATCATCCCCGGAGGTTCCATTTGCTCAATTGTTGGCATCTTCACTGGACCGGGCTCATAAAAGTAATGGGACGCAGAAGTTTGCATTACACAATTATGAATTTCAGCCTTATCAACAATATCCTGGAAGCCCAGGTGCCCAACTCATATCACCTGGATCTGCCTTCTCAACTTCAGGCACCTCTACCCCTTTCCCTGATAGACGCCAACCTCTTGAATTCCGCAAAGGTGAAACACCTAGGATCTTGGGTTTTGAACACTTCTCCACTCGCAAATGGGGTTCAAGGCTTGGATCTGGATCTTTAACACCAGATGGTGCCGGGCAAGGTTCAAGGTTAGGTTCAGGATCTTTGACACCTGATGGTGTTGGGCAAGGTTCAAGGTTAGGTTCAGGATCTTTGACACCTGATGGTGTTGGACTTGCTTCACAGATAGGTTCCGGGTGTATGACACCTGATGGTCTGGGGCAGGATTCCAGGTTGGGTTCAGGCTCATTGACACCTGATGGTGCTGGGCCAACTCAAAACAGAGTCTATGAGCAAAACCAGATTTCTAAGGAAGCATCTCTTGCAAACTCAGATCATGGATATCAAAATAATGCAACATTAGCCGATCACAGAGTTTCATTTGAATTGACTGAGGAAGACGTTGCACGATGTCTTGCAAATAAAACAGGGATATTGCTTCGAAACATATCAAGGTCTTCGCAGGGTATATTATCAAAAGATCCTATTGACAATGAAAGGATACAAAAAGACAATTGTTGTAATGTATGTTCAGGGAAAACAAATGATAAGTCTGACAATCCTCATGGAGAAGGAGAGCAGTACTGTCAGAAGCATGTTAATTCTTCTAAAGAATTCAATTTTGACAACACTAAAGGTAATGTTTCTGGTACTGCTGCCAATGGGTCGGAGTGGTGGAGTAACAAAAAGGCTGTTGGGAAAGAAGGTAGAAACAGTTGGGCTTTCTTCCCAATGTTACAACCAGATATCAGTTGA 1524 0.4567 MGSFNNTVEIVNETVNAAAAAIITAESRVQPTTVPKKRWGSCWSLYSCFGSQKSSKRIGHAVLVPEPVAPTGPTAVAAPNPSTAIVMPSIAPPSSPASFLQSDPSSAIQSPAGLLSLTSLSVNAFSSGGPASIFAIGPYAYETQLVSPPVFSNFTTEPSTASFTPPPESVQLTTPSSPEVPFAQLLASSLDRAHKSNGTQKFALHNYEFQPYQQYPGSPGAQLISPGSAFSTSGTSTPFPDRRQPLEFRKGETPRILGFEHFSTRKWGSRLGSGSLTPDGAGQGSRLGSGSLTPDGVGQGSRLGSGSLTPDGVGLASQIGSGCMTPDGLGQDSRLGSGSLTPDGAGPTQNRVYEQNQISKEASLANSDHGYQNNATLADHRVSFELTEEDVARCLANKTGILLRNISRSSQGILSKDPIDNERIQKDNCCNVCSGKTNDKSDNPHGEGEQYCQKHVNSSKEFNFDNTKGNVSGTAANGSEWWSNKKAVGKEGRNSWAFFPMLQPDIS. 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03928 507 MobiDBLite consensus disorder prediction 215 350 - -
Seca10g03928 507 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 11 506 IPR040420 -
Seca10g03928 507 MobiDBLite consensus disorder prediction 332 350 - -
Seca10g03928 507 MobiDBLite consensus disorder prediction 215 240 - -
Seca10g03928 507 MobiDBLite consensus disorder prediction 156 177 - -
Seca10g03928 507 MobiDBLite consensus disorder prediction 268 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03928 Seca-Chr10 83408141 83411938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03928 - - gmx:100806399 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03928 10 83408141 83411938 Seca10g03928 10 83408141 83411938 ECH
Seca10g03928 10 83408141 83411938 Seca10g03928 10 83408141 83411938 PCT