Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03917 ATGGCGTCTCTTGAACTGAAGCTGTCCTCTGCTCGCGGGCTGAAAAACGTTAACTGGCGTCACGGCCCTAACAAGCCATACGTCGTCGTTTGGGCTGACCCAAGCAACAAATTCTCCACCAAAGTAGACGAAAACGGCGATACTGACGCCGAATGGGACCAAACCCTGGTCCTCCCTTTGCCACCGAAACCACTCGAGGATCTCACTCTTTACATCGACGTCGTTCATGCCGGCTCTGAAGAAGACACCAAGCCGGTCATCGGCTCGGCTCGGCTCAAGCTGACGGAAGTCAAAGACAACGCTGGGATCGGCGAGCGCGTGAGCCGCACGCTCACGCTGACGCGACCTTCTGGAAGGCCGCAAGGGAAGGTTGACGTTAAGGTCACGATCAAAGAGCCTAGCTATCGTGCGCAGGGTTCGTACTACGCTCCTCCTTACGGTGTTCCCCCACCTCCATCGCGGGATTTTCCCGCTGCGCCGCCGGCTTATGGCTACCAATACGGCGCTCCACCCCAGGGTTCGTATAATTACCCCGCTGCACCTCCATCGGGGTATCCTTACAATGCGGCGCCGCAAACGGCGTTGTATGGGAATCAGGGGTATCCGGCGCAAACGCCGTTGTATGGGAGTCAGGGGAGTTATGGAGGGAATGGGCAGCCGGTGGAGAAGAAGAAAAGCAAGTTTGGTGGGATGGGGACAGGATTGGCTGTAGGCGCAGTTGCTGGGGCTCTTGGTGGAATCGCGCTGGTGGAGGGTGCTGAGTACCTTGAGAACAAGATTGCTGATGACGCGGCAAAGAAAGTTGAGGCAGATCTTGCTGCAGAGAAAGTTGAGGAAGAACTTGCAGCTGAATCTGATGTCGATTTTGGTTACGCCGGTGATGATTTCTAG 891 0.5623 MASLELKLSSARGLKNVNWRHGPNKPYVVVWADPSNKFSTKVDENGDTDAEWDQTLVLPLPPKPLEDLTLYIDVVHAGSEEDTKPVIGSARLKLTEVKDNAGIGERVSRTLTLTRPSGRPQGKVDVKVTIKEPSYRAQGSYYAPPYGVPPPPSRDFPAAPPAYGYQYGAPPQGSYNYPAAPPSGYPYNAAPQTALYGNQGYPAQTPLYGSQGSYGGNGQPVEKKKSKFGGMGTGLAVGAVAGALGGIALVEGAEYLENKIADDAAKKVEADLAAEKVEEELAAESDVDFGYAGDDF. 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03917 296 Pfam C2 domain 3 103 IPR000008 -
Seca10g03917 296 Gene3D C2 domain 2 137 IPR035892 -
Seca10g03917 296 PANTHER INGRESSION PROTEIN FIC1 3 240 - -
Seca10g03917 296 SMART C2_3c 3 106 IPR000008 -
Seca10g03917 296 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 132 IPR035892 -
Seca10g03917 296 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Seca10g03917 296 CDD C2_SRC2_like 3 126 IPR044750 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03917 Seca-Chr10 82783083 82783973 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03917 - - gmx:100817630 328.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03917 10 82783083 82783973 Seca10g03917 10 82783083 82783973 ECH