Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03915 ATGGCTTCTCGCTACGAAGTTGAAGTAAAGCTATCATCAGCTCGCGGGCTGAAAAACGTGAACTGGCGCCACGGCGCGAACAGGCCATACGCCGTCGTTTGGGTTGATCCAAAGAACAAGTGCTCAACAAGAGTAGACGAAGACGGTGACACCGAAGCCAATTGGGACCAAACGCTCGTCCTCCCTTTACCCCCTGAACCCATCGAGGATCTCACTCTTTACATCGACATCGTCCACGCCGGCTCCGAAGAAGAAACCAAGCCACTCATCGGCTCGGCTCGGCTCAAACTCTCCGATGTCCTCGACGACGTCGGAATCGGAGAACGCGCAAGCCGAAACCTCACGCTGAAGCGACCCTCAGGAAGGCCACAAGGAAAGATTGACGTTAAGGTTACAATCAGAGAGCCTGGCTATCGTGCGCCGGGTGGGTATTACGCTCCTCCTTATGGTGTCCCACCACCACCTGCGCAATCACGTGATTATTATTCCTCTGCGCCGGGGTATGGGTACCCTTACGGTGGGGCTCCGCAGGATTATAATTATTCTGCTGCGCCGCCAGCTGGGTATCCTTATAATGCGGCTCCGCAAACGGCGTCGTATGGTGGTCAGGGGTATCCATCGCAAACGGCGTCGTATGGTGGTCAAGGGTATCCAACGCAAACGGCGTCGTATGGACAGGGGAGTTATCAGCCGGAAGAGAAGAAGAAGAGTAAGTTTGGAGGGATGGGGACGGGATTAGCTGTGGGTGCGGTTGCTGGGGCTCTTGGTGGAATCGCACTGGTGGAGGGTGCGGAGTATCTCGAGGACAAGATTGCTGATGACGTGGCAGAGAAGGTTGAGGATGATCTGGGTTATGATGATGGCGATGGTGGTTTCGATGGAGATGATTTCTAG 894 0.5492 MASRYEVEVKLSSARGLKNVNWRHGANRPYAVVWVDPKNKCSTRVDEDGDTEANWDQTLVLPLPPEPIEDLTLYIDIVHAGSEEETKPLIGSARLKLSDVLDDVGIGERASRNLTLKRPSGRPQGKIDVKVTIREPGYRAPGGYYAPPYGVPPPPAQSRDYYSSAPGYGYPYGGAPQDYNYSAAPPAGYPYNAAPQTASYGGQGYPSQTASYGGQGYPTQTASYGQGSYQPEEKKKSKFGGMGTGLAVGAVAGALGGIALVEGAEYLEDKIADDVAEKVEDDLGYDDGDGGFDGDDF. 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03915 297 SMART C2_3c 6 109 IPR000008 -
Seca10g03915 297 Gene3D C2 domain 1 135 IPR035892 -
Seca10g03915 297 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Seca10g03915 297 PANTHER INGRESSION PROTEIN FIC1 7 250 - -
Seca10g03915 297 Pfam C2 domain 7 102 IPR000008 -
Seca10g03915 297 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 135 IPR035892 -
Seca10g03915 297 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03915 Seca-Chr10 82624789 82625682 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03915 - - gmx:100817630 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03915 10 82624789 82625682 Seca10g03915 10 82624789 82625682 ECH