Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03882 ATGACGGATGTGATACTGCATATATACGATGTGACGAATAGTGGATCGGAGAAGACCAACAACACCATTGTTCAGATCAACAAGATCTTCAAGGATGGAATTGGTCTCGGTGGTATCTTCCATAGCGCCGTTCAGGTTTATGGAGAAGATGAATGGTCGTTTGGATTCTGTGAGCAAGGTACTGGAGTTTTTAGTTGCCCATCTGGAAAGAATCCAATGTATACATACCGTGAATTCATTGTTCTAGGGAAAACAAACTTTTCCATTTTCAAGGTAAATCAAATATTAAGAGAACTCAGTAGAGAGTGGCCTGGAAGTTCATATGATCTATTGGCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGGCTTGGTGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCCAATGCTGGTGATACAGCTATGGAAGTGGCTGGAAATACAGCATTACGGTTCCGGCAAGCCAAAACAGAGATTGTATCCGCGAGCAAAGTAGCATACAGGTTCCTCTTAGGTGTTACCAATAATGTTACTAATAATGTTACTAATAATGTTAAAATTGGTCCAGAGTCCCCTAACAATTCAAACAGAGGAGGATCCCCTAGATTTCAAGCTTCTTGGTTGAAAAATATGATTACTAATGGTGCCAAACCATCTACGAGTTCAGAAGCTGAGAATCAGAATGGTGTTGTGCCTCTACAACCAACACGAGAAGATGACAAGTATCTGCTACAGGGTTCATTTTCACATGATAGTTGA 771 0.4047 MTDVILHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGEDEWSFGFCEQGTGVFSCPSGKNPMYTYREFIVLGKTNFSIFKVNQILRELSREWPGSSYDLLAKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVTNNVKIGPESPNNSNRGGSPRFQASWLKNMITNGAKPSTSSEAENQNGVVPLQPTREDDKYLLQGSFSHDS. 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03882 256 MobiDBLite consensus disorder prediction 217 256 - -
Seca10g03882 256 Pfam PPPDE putative peptidase domain 3 147 IPR008580 GO:0008233
Seca10g03882 256 Gene3D PPPDE domains 1 169 IPR042266 -
Seca10g03882 256 PANTHER DESUMOYLATING ISOPEPTIDASE 2 204 IPR008580 GO:0008233
Seca10g03882 256 MobiDBLite consensus disorder prediction 188 207 - -
Seca10g03882 256 SMART DUF862_2a 2 157 IPR008580 GO:0008233
Seca10g03882 256 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
Seca10g03882 256 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03882 Seca-Chr10 81305215 81309675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03882 - - gmx:100814440 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03882 10 81305215 81309675 Seca10g03882 10 81305215 81309675 ECH