Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03852 ATGAAGGCAGTCTCTGGCCGTTCAGGGGTTGAGTCAGTCTCTGTGGATATGAAGGATCAGAAAATGACTTTAATTGGGGACATAGACCCTGTTCGTGTAGTGGGAAAGCTGAGGAAATTGTGTCATGCTGAAATAGTTTCAGTTGGACCAGCCAAAGAGGAGAAGAAGGAGGAACCTAAGAAGGAGGAGAAGAAGCCAGAGGAAAAGAAAAAGGATCCAAATGAACAAATGGCTGAACTTGTGAAGTTCTATGAAGCATATTATAATCAGACGAGACAACCATATCCATATTACTATTACAGAACTGCGGAAGAGAATCCTAATGGCTGTACTATCTGCTAA 342 0.4211 MKAVSGRSGVESVSVDMKDQKMTLIGDIDPVRVVGKLRKLCHAEIVSVGPAKEEKKEEPKKEEKKPEEKKKDPNEQMAELVKFYEAYYNQTRQPYPYYYYRTAEENPNGCTIC. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03852 113 ProSiteProfiles Heavy-metal-associated domain profile. 1 49 IPR006121 GO:0046872
Seca10g03852 113 SUPERFAMILY HMA, heavy metal-associated domain 2 40 IPR036163 GO:0046872
Seca10g03852 113 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 110 - -
Seca10g03852 113 MobiDBLite consensus disorder prediction 48 76 - -
Seca10g03852 113 Pfam Heavy-metal-associated domain 1 39 IPR006121 GO:0046872
Seca10g03852 113 Gene3D - 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03852 Seca-Chr10 80457021 80457745 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03852 - - gmx:100306444 119.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03852 10 80457021 80457745 Seca10g03852 10 80457021 80457745 ECH