Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03831 ATGAAAACTCTTCTTTGTGCATCAAACCCATCTCTCTATCTCACAAAATCTTCTCCAGGGAAACCAAAGTTCCCACCTTTTCACCCCAGAACTACAGAAAAACTCAACTACCACCACCCATTCAGCACATTAATGAAGCCACTTGCAAGTGCCAAAGGCTTTTCCTCCGGTAGACCTTCAATTGTTGAAAGTGATGTCACTAGCAAGAGAAAGCCCAGCAGAAGGGACAACAATGAGGATGATGAGATTCCAAGGGAAGTTTTTTACAGGATAATTAGAAGAATCTTGTTCTCTGTTGGGGTTCCAATGGGGTTGGGTTTGGCATTCTTGCATCTTTATGGTGAACTTAAGGATAGACAAATATGGGATGCACCCTTATGGGTCCCATTCATGACAACTTTATTAACATTTGGGGCTTCAGCACTTGGAATTGCATATGGTACACTTTCAACAAGTTTGGATGCAGAGAGGGAAGGTTCATTTCTTGGGCTAGATGAGGTTCAGAAGAATTGGGTAGAGATGTGGCAGGAAGATCAGGATGCAAGCTAG 549 0.4281 MKTLLCASNPSLYLTKSSPGKPKFPPFHPRTTEKLNYHHPFSTLMKPLASAKGFSSGRPSIVESDVTSKRKPSRRDNNEDDEIPREVFYRIIRRILFSVGVPMGLGLAFLHLYGELKDRQIWDAPLWVPFMTTLLTFGASALGIAYGTLSTSLDAEREGSFLGLDEVQKNWVEMWQEDQDAS. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03831 182 Pfam Photosynthesis affected mutant 68 64 177 IPR021855 -
Seca10g03831 182 MobiDBLite consensus disorder prediction 64 80 - -
Seca10g03831 182 PANTHER PROTEIN PAM68, CHLOROPLASTIC 1 180 IPR021855 -
Seca10g03831 182 MobiDBLite consensus disorder prediction 52 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03831 Seca-Chr10 79742431 79742979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03831 - - gmx:100782877 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03831 10 79742431 79742979 Seca10g03831 10 79742431 79742979 ECH