Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03824 ATGGCATCATCAAGCACAAGCAACAACCACATGGACGACGTCGATCGCTTGTTCGCGTGCTTCAAGTGCGGTTTATCCCCTCCCGAATCTGCTTTGCGGGAAAGAAAAAGAAGAAAAAGGAGAGTGGAGAAGGGAAGTTCAAAGCATGAGTCTCCATCAGAATCTCCTTGTCCAGATTCAGGTGGAGGAGAACAGAAAACCCCCTTAACATGCAGCAAAACAAGCATCCAGTCTTCCGTTGAAAGAATTAAATCAGCAGTAGCCAAAGCCAGAAGCTTTAGTCGTGGGAAGCAGATCTCACCAGTTGTATTTTATGGATCTCCTCACGGTGTGCCTCCTAAAAAGCCAACCCGTTTATTATGGCGATTGTTACAACAAGAGATACCTTTTCATCTCCCTCAGCGAAATAAATTAAACTTAAGGAAGGAAGTTTGGATTACATTCCCAAGGCAGGAAGAAGCAATGAAGTTTGCTAAAGGACAAGACGATGTTCGTGTTTTTAGTTATCAAGATCACTTTAATGGCCAAAGAAGGTTCCTTGCATCTACATATACAGAATTCTGGCGAAGGTACAAAAATATGGATTCTAAATTTCGTCATCATTATGAAGTGATTCAAGAGGTAGTGATGTTCTATTCTATGTTCACTGATTTAACTGGAGAAATGTTTATTTTCTCTCAGGGTTTACCATGCCACCTTTATTTTGATTTGGAGTTTAATAAGAGAGTCAACATAGGAAAGAATGGAGATGAAATGGTTGATCTCTTGATATCAGTAGTTCTAGAAGCGTTACATGAAAAATATGCAATCCATGGAGACCACAATTGGATAGTAGAACTCGATTCTTCAACTGAAGGTTTTGTCCATGTTTTAACTCTTACCAAGGAAGCAATTGTTGAGTGCTGCTATGACATTGATTCTGATTTTTCCTCCATATTACGATCCTTATCATCTCTTTTAATTGAACTTGTAGATAAGTTCTCTCGTCATCTAATAATTCGCATACCAAAGGCTGCTTTTAAGGACAACTCTCATGCAGGTGCATTTGTTTCAGAAATATGCTCAAGAATTCTAAATGCAAGGGGGGAAGATAAAAGTTTTGAAAAATTGTTTGTAGTGAAAGATTCAAACAGCAATGAATCTGCCAACCAACTTTTTGTAGATACTGCTGTATATTCTCGGAATCGTTGTTTCCGTCTTCTTCTATCTTCAAAGGCAGGAAAAAGTTCAGTTCTTCTACCGACAGAGCGATATAAGTGCAAGAACTTGGGTGAAGAAGACTTGTTCATGGCTTCCTTGATATGCAATATGGATGCTGATTGTGAAAAGTATCTGCGCTGCAAAACAGACTTAGATTGCGTGAAGACTCTGCATTTTGATACGGAGGTGAATTGTAATCTTGGAAATTCCTGCCAAATTCCTCCAGAATTTACATTGAATACTTGCCAAAGTGATGTTTCAACAACATACTTCATGGAAAAGTCACCATTCCCATTTCTGGACAATTTTATACTATCTGTTGCTTCTGTCGGGAATATACCAGGAAAAATTCATAGCTGGTATTTATTCTCAGAATATGGACTGATGGTCTACAGCATGACAAAAAATAGATACTGTGAACGAATTGGCAGACAGCATAAAAGCAATAATGTGATATATGTTGTTGATCTAAGAAGGGCAGTGTATTATCAGAAATGTCATGATCCTGACTGCAGAGGTTACCGATCTCCCTTGCGACAAATCCCAGTTCATGTGTTCTCCAATCCTTCATTTGTCATTGGTTCATCTGGAATGTTAGATGATAAACAGCCAGTAGATGATGAGTGGAGAGATAAATGTAATGATAACGACAAAGAAAATTTTCTGCAATATGAAGACACCGTAGAGAACAACTCCAATGATTCTTGGTGGCTAGAAGCCATTAAAGTTTCTGAGGATATGGAGAATAAGCAAACCACGACAGACCTAAGCAGTATGGAGGTAATTGATGATGGAGATGAAGAGTGGTGGCTGGCTGTTGAAAGGACTGCATCCCAGGCTGAATTGACATGCTCCGATTAA 2061 0.3906 MASSSTSNNHMDDVDRLFACFKCGLSPPESALRERKRRKRRVEKGSSKHESPSESPCPDSGGGEQKTPLTCSKTSIQSSVERIKSAVAKARSFSRGKQISPVVFYGSPHGVPPKKPTRLLWRLLQQEIPFHLPQRNKLNLRKEVWITFPRQEEAMKFAKGQDDVRVFSYQDHFNGQRRFLASTYTEFWRRYKNMDSKFRHHYEVIQEVVMFYSMFTDLTGEMFIFSQGLPCHLYFDLEFNKRVNIGKNGDEMVDLLISVVLEALHEKYAIHGDHNWIVELDSSTEGFVHVLTLTKEAIVECCYDIDSDFSSILRSLSSLLIELVDKFSRHLIIRIPKAAFKDNSHAGAFVSEICSRILNARGEDKSFEKLFVVKDSNSNESANQLFVDTAVYSRNRCFRLLLSSKAGKSSVLLPTERYKCKNLGEEDLFMASLICNMDADCEKYLRCKTDLDCVKTLHFDTEVNCNLGNSCQIPPEFTLNTCQSDVSTTYFMEKSPFPFLDNFILSVASVGNIPGKIHSWYLFSEYGLMVYSMTKNRYCERIGRQHKSNNVIYVVDLRRAVYYQKCHDPDCRGYRSPLRQIPVHVFSNPSFVIGSSGMLDDKQPVDDEWRDKCNDNDKENFLQYEDTVENNSNDSWWLEAIKVSEDMENKQTTTDLSSMEVIDDGDEEWWLAVERTASQAELTCSD. 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03824 686 MobiDBLite consensus disorder prediction 30 75 - -
Seca10g03824 686 MobiDBLite consensus disorder prediction 51 75 - -
Seca10g03824 686 Pfam Herpesviridae UL52/UL70 DNA primase 523 583 - -
Seca10g03824 686 PANTHER DNA-DIRECTED PRIMASE / POLYMERASE PROTEIN 28 652 IPR044917 GO:0003887|GO:0003896|GO:0042276
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03824 Seca-Chr10 79661952 79669208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03824 K22761 - gmx:100789800 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03824 10 79661952 79669208 Seca10g03824 10 79661952 79669208 ECH