Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g03759 ATGGAAAGCAGCATAAAAATTGAAATTGCAGAAGAAGGTTCTCCTGAAGTTCCATCACTAATTAAGTACATATCATCAAAGGAAGTTAATGGTTTTGATACTTTGGACTCTCAATTTCCCAGCCCAACTGCCAAAGGAAATGAAGCAACCTCACCTGGAAGACAAGAAGATGAACCAGTAGTCATCAATCATCAAAGGAAGCATTCTGTTTCTATCAGCATGCCACTCACTTCTGAAGAGGTTCAGCTTCAGCCAATGAACAACAAAAGAGTTTATTCCAGTGGAGAAACAGTTTCAAAAGATGGTGTTCCCAATCCCACTCCTGGATCAGGAACTCAAGGTTCTAAGCCTCCACATCCATCAAAATGTTACTCTCAACCAATGCTAAATGGTGCTGTGTATCCAGAGGGGGCTAATGGTGCACAAATGTCAAACCATCCTGGCATCAACATGTTCAGGGATAAGAGATTTGACTCTTTTAAAACATGGTCTGGGACACTTGAGAGACAATTATCAATTCTACGTGGAAAGGCACCTTCTGCAATTGCACAAGATGGAAACAACTCTAGGAGGAGCATGGAGAAGCCTTTACCTGTTGATCGGTATTTTGATGCATTGGAAGGTCCTGAGTTAGAAACTCTTAGGTCTTCAGAAGAGATTGTGCTTCCTGAGGACAGGCAATGGCCATTTCTTCTTCGGTTTCCTGTTTCATCTTTTGGTATCTGCCTTGGAGTTAGCAGCCAAGCAATTCTTTGGAAAGCACTTGCAACATCTCCTTCCACTGAATTTCTTCACATAAGCCTCAAAGCAAATCTAATCTTGTGGATCATCTCCATTGCTCTTGTTGCTACTGTTTTCACCATCTACCTTCTTAAATTCCTTCTCTACTTTGAGGCAGTTCGTCGTGAGTACTACCATCCAATTCGTGTTAACTTCTTCTTTGCACCATGGATAGCTCTCTTGTTCTTGGCTCTTGGTGTTCCCCCATCAGTTACCAAAGACTTGCATCAATCTCTTTGGTACATTCTAATGGTACCAATTTTCTTTCTTGAACTTAAGATCTATGGACAGTGGATGTCTGGGGGCCAAAGGAGGCTCTCAAAGGTGGCTAACCCTTCAAATCACCTATCAGTTGTTGGAAACTTTGTAGGGGCTTTGCTTGGTGCATCTTTGGGTCTAAAAGAAGGACCTATTTTCTTCTTTGCTGTTGGGTTGGCTCATTACACTGTCTTATTTGTAACTCTCTATCAGAGACTTCCAACAAATGAGACCCTCCCAAAAGAGCTCCATCCAGTGTTCTTTCTGTTTGTTGCAGCACCTAGTGTTGCTTCCATGGCATGGGCTAGGATTCAGGGTTCTTTTGATTATGGATCAAGGATTGCCTATTTCATTGCCCTGTTCCTTTATTTCTCACTGGCTGTCCGGATCAATTTTTTCAGAGGATTCAAATTCTCCCTTTCATGGTGGGCATATACTTTTCCAATGACTGGTGCAGCAATTGCAACTATAAGATACTCAAATCAAGTCCCAAATGTTGTTACTAAGACACTGTGTGTTATTCTAGCTCTCATCTCCACATTAACAGTAACAGCACTGCTTGTGTCAACTATATTGCATGCCTTTGTCTTCAGAGACCTCTTCCCCAATGATATTGCAATTGCTATAAGTGATAGAAAGAGAAAACCACATAAGAAGTGGTTAGGTCTTAGATATGGGAGCCATGATTCCAAGGAGATTGAAAATTACTTGAAGTTTGTGAACACAGATGAAATTAACTTAGAAGATTCTACCCCACAACCATCCTCAAGAGGCACAGAGACTTCACCATCTGTCTGA 1836 0.415 MESSIKIEIAEEGSPEVPSLIKYISSKEVNGFDTLDSQFPSPTAKGNEATSPGRQEDEPVVINHQRKHSVSISMPLTSEEVQLQPMNNKRVYSSGETVSKDGVPNPTPGSGTQGSKPPHPSKCYSQPMLNGAVYPEGANGAQMSNHPGINMFRDKRFDSFKTWSGTLERQLSILRGKAPSAIAQDGNNSRRSMEKPLPVDRYFDALEGPELETLRSSEEIVLPEDRQWPFLLRFPVSSFGICLGVSSQAILWKALATSPSTEFLHISLKANLILWIISIALVATVFTIYLLKFLLYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVTKDLHQSLWYILMVPIFFLELKIYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLGASLGLKEGPIFFFAVGLAHYTVLFVTLYQRLPTNETLPKELHPVFFLFVAAPSVASMAWARIQGSFDYGSRIAYFIALFLYFSLAVRINFFRGFKFSLSWWAYTFPMTGAAIATIRYSNQVPNVVTKTLCVILALISTLTVTALLVSTILHAFVFRDLFPNDIAIAISDRKRKPHKKWLGLRYGSHDSKEIENYLKFVNTDEINLEDSTPQPSSRGTETSPSV. 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g03759 611 Gene3D - 230 547 IPR038665 -
Seca10g03759 611 PANTHER S-TYPE ANION CHANNEL SLAH3 150 561 IPR030183 GO:0006873|GO:0008308|GO:0016020
Seca10g03759 611 MobiDBLite consensus disorder prediction 32 50 - -
Seca10g03759 611 CDD TDT_SLAC1_like 233 536 - -
Seca10g03759 611 MobiDBLite consensus disorder prediction 590 611 - -
Seca10g03759 611 MobiDBLite consensus disorder prediction 92 120 - -
Seca10g03759 611 MobiDBLite consensus disorder prediction 32 60 - -
Seca10g03759 611 Pfam Voltage-dependent anion channel 234 537 IPR004695 GO:0016020|GO:0055085
Seca10g03759 611 MobiDBLite consensus disorder prediction 92 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g03759 Seca-Chr10 75327989 75332465 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca10g03759 K26672 - gmx:100816885 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g03759 10 75327989 75332465 Seca10g03759 10 75327989 75332465 ECH
Seca10g03759 10 75327989 75332465 Seca10g03759 10 75327989 75332465 PCT